RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TIAM1Q13009 1591 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 DIP2AQ14689 1571 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 FYCO1Q9BQS8 1478 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 PLEKHG1Q9ULL1 1385 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 CHRNA4P43681 627 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 DGKGP49619 791 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 SCNN1DP51172 638 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 PCBP4P57723 403 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 PLPP7Q8NBV4 271 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 SEMA6BQ9H3T3 888 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 DNAAF2Q9NVR5 837 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 SLC52A1Q9NWF4 448 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 MARK1Q9P0L2 795 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 EFCAB6Q5THR3 1501 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 ADAMTS13Q76LX8 1427 aa4.71□□□□□ -1.66
CHMP4A-208ENST00000534106 CEP350Q5VT06 3117 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 NKTRP30414 1462 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 BCL9LQ86UU0 1499 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 A6NJY4 79 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 HOXB4P17483 251 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 ATP4AP20648 1035 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 GATA4P43694 442 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 TNP2Q05952 138 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 SF3B2Q13435 895 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 WASHC4Q2M389 1173 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 PLVAPQ9BX97 442 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 GDPD2Q9HCC8 539 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 PIK3C2BO00750 1634 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 AHDC1Q5TGY3 1603 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 MROH1Q8NDA8 1641 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 MST1RQ04912 1400 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 CEP162Q5TB80 1403 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 NCOA3Q9Y6Q9 1424 aa4.7□□□□□ -1.66
CHMP4A-208ENST00000534106 METP08581 1390 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 KIF15Q9NS87 1388 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 ASXL1Q8IXJ9 1541 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 SPDYE3A6NKU9 549 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 CDK2AP1O14519 115 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 BACH1O14867 736 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 APBA3O96018 575 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 PSME1Q06323 249 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 IRF5Q13568 498 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 EZH2Q15910 746 aaKnown RBP4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 EML3Q32P44 896 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 PRRT3Q5FWE3 981 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 KRT27Q7Z3Y8 459 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 FCHSD1Q86WN1 690 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 UNC5CLQ8IV45 518 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 ZIC5Q96T25 663 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 AVENQ9NQS1 362 aaPredicted RBP4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 ZDHHC3Q9NYG2 299 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 PARP3Q9Y6F1 533 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 ZFYVE9O95405 1425 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 NOS1P29475 1434 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 BLMP54132 1417 aaPredicted RBP4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 UTRNP46939 3433 aa4.69□□□□□ -1.66
CHMP4A-208ENST00000534106 KANK1Q14678 1352 aa4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 FOXO3O43524 673 aa4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 SPATA31C1P0DKV0 1188 aa4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 KLF15Q9UIH9 416 aa4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 CCDC9Q9Y3X0 531 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 NWD1Q149M9 1564 aa4.68□□□□□ -1.66
CHMP4A-208ENST00000534106 SHPRHQ149N8 1683 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 ABCC5O15440 1437 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 ADGRL3Q9HAR2 1447 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 SCO2A0A1W2PP80 73 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 TMEM229AB2RXF0 380 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 FAM157BP0CG42 384 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 SKIP12755 728 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 SOX11P35716 441 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 ZMYM1Q5SVZ6 1142 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 ZNF468Q5VIY5 522 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 LRRC69Q6ZNQ3 347 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 TRIM11Q96F44 468 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 ZNF232Q9UNY5 417 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 NOD1Q9Y239 953 aa4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 KDM5AP29375 1690 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-208ENST00000534106 CEP152O94986 1710 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 ELOA3CA0A087WX78 387 aaPredicted RBP4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 FAM83GA6ND36 823 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 ELOA3DA6NLF2 546 aaPredicted RBP4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 TXLNAP40222 546 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 NEUROD1Q13562 356 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 MTFR1Q15390 333 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 ELOA3BQ3SY89 546 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 SYT9Q86SS6 491 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 ELOA3Q8NG57 546 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 SLC4A9Q96Q91 983 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 USP3Q9Y6I4 520 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 C1orf167Q5SNV9 1468 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 RALGAPBQ86X10 1494 aa4.66□□□□□ -1.66
CHMP4A-208ENST00000534106 PTCH1Q13635 1447 aa4.65□□□□□ -1.66
CHMP4A-208ENST00000534106 TRIM37O94972 964 aa4.65□□□□□ -1.67
CHMP4A-208ENST00000534106 GTF2IP78347 998 aa4.65□□□□□ -1.67
CHMP4A-208ENST00000534106 TRIM28Q13263 835 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-208ENST00000534106 LAMC2Q13753 1193 aa4.65□□□□□ -1.67
CHMP4A-208ENST00000534106 VPS72Q15906 364 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms