RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 IMPACTQ9P2X3 320 aa17.8■□□□□ 0.44
RRP8-204ENST00000533907 RCOR1Q9UKL0 485 aa17.8■□□□□ 0.44
RRP8-204ENST00000533907 KINO60870 393 aaKnown RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 TAF5LO75529 589 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 KSR2Q6VAB6 950 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 NAT10Q9H0A0 1025 aaKnown RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 UTYO14607 1347 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 ABCC6O95255 1503 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 ANXA1P04083 346 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 HSP90B1P14625 803 aaKnown RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 DHX8Q14562 1220 aaKnown RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 FILIP1Q7Z7B0 1213 aa17.79■□□□□ 0.44
RRP8-204ENST00000533907 CCDC8Q9H0W5 538 aaPredicted RBP17.79■□□□□ 0.44
RRP8-204ENST00000533907 TUBB4AP04350 444 aa17.78■□□□□ 0.44
RRP8-204ENST00000533907 FAM160A1Q05DH4 1040 aa17.78■□□□□ 0.44
RRP8-204ENST00000533907 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
RRP8-204ENST00000533907 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
RRP8-204ENST00000533907 GOLPH3LQ9H4A5 285 aa17.78■□□□□ 0.44
RRP8-204ENST00000533907 TLR7Q9NYK1 1049 aaKnown RBP17.78■□□□□ 0.44
RRP8-204ENST00000533907 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.78■□□□□ 0.44
RRP8-204ENST00000533907 V9GYY5 206 aaPredicted RBP17.78■□□□□ 0.44
RRP8-204ENST00000533907 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
RRP8-204ENST00000533907 ADD1P35611 737 aaKnown RBP17.77■□□□□ 0.44
RRP8-204ENST00000533907 KCNJ6P48051 423 aa17.77■□□□□ 0.44
RRP8-204ENST00000533907 Q6ZUG5 572 aa17.77■□□□□ 0.44
RRP8-204ENST00000533907 CCDC150Q8NCX0 1101 aa17.77■□□□□ 0.44
RRP8-204ENST00000533907 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
RRP8-204ENST00000533907 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.44
RRP8-204ENST00000533907 TRMT1Q9NXH9 659 aaKnown RBP17.77■□□□□ 0.44
RRP8-204ENST00000533907 U3KPZ7 1027 aaPredicted RBP17.77■□□□□ 0.44
RRP8-204ENST00000533907 GRM8O00222 908 aa17.77■□□□□ 0.43
RRP8-204ENST00000533907 SNW1Q13573 536 aaKnown RBP17.77■□□□□ 0.43
RRP8-204ENST00000533907 SUCLG2Q96I99 432 aa17.77■□□□□ 0.43
RRP8-204ENST00000533907 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 TEFQ10587 303 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 USHBP1Q8N6Y0 703 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 ENGASEQ8NFI3 743 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 LINS1Q8NG48 757 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
RRP8-204ENST00000533907 PSDA5PKW4 1024 aaPredicted RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 KCNQ3O43525 872 aa17.75■□□□□ 0.43
RRP8-204ENST00000533907 PFKFB2O60825 505 aa17.75■□□□□ 0.43
RRP8-204ENST00000533907 H2AFXP16104 143 aaPredicted RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 BMS1Q14692 1282 aaKnown RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 BICC1Q9H694 974 aaKnown RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 SLIT3O75094 1523 aa17.75■□□□□ 0.43
RRP8-204ENST00000533907 SCRN1Q12765 414 aa17.75■□□□□ 0.43
RRP8-204ENST00000533907 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
RRP8-204ENST00000533907 COL15A1P39059 1388 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 NRDCO43847 1150 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
RRP8-204ENST00000533907 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
RRP8-204ENST00000533907 KAZALD1Q96I82 304 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 BPIFA3Q9BQP9 254 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 CALCOCO1Q9P1Z2 691 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 MST1RQ04912 1400 aa17.74■□□□□ 0.43
RRP8-204ENST00000533907 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
RRP8-204ENST00000533907 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 FSIP1Q8NA03 581 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 ZNF446Q9NWS9 450 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 ARHGEF25Q86VW2 580 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 PPP1R13BQ96KQ4 1090 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 TIGD1Q96MW7 591 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 ZNF609O15014 1411 aa17.73■□□□□ 0.43
RRP8-204ENST00000533907 KIF1AQ12756 1690 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
RRP8-204ENST00000533907 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
RRP8-204ENST00000533907 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
RRP8-204ENST00000533907 MRPS27Q92552 414 aaKnown RBP17.72■□□□□ 0.43
RRP8-204ENST00000533907 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 USP28Q96RU2 1077 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 BCL11BQ9C0K0 894 aaPredicted RBP17.72■□□□□ 0.43
RRP8-204ENST00000533907 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
RRP8-204ENST00000533907 PTPDC1A2A3K4 754 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 CCP110O43303 1012 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 GCP02774 474 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 ATP5JP18859 108 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 PROSER3Q2NL68 480 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 ME1P48163 572 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 FGD1P98174 961 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
RRP8-204ENST00000533907 NOL10Q9BSC4 688 aaKnown RBP17.71■□□□□ 0.43
RRP8-204ENST00000533907 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
RRP8-204ENST00000533907 SIL1Q9H173 461 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
RRP8-204ENST00000533907 CYP21A2P08686 494 aa17.7■□□□□ 0.42
RRP8-204ENST00000533907 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms