RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 PSMD14O00487 310 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 HOXB7P09629 217 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
COPB1-210ENST00000533533 NOGQ13253 232 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
COPB1-210ENST00000533533 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
COPB1-210ENST00000533533 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
COPB1-210ENST00000533533 RGS19P49795 217 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 HUNKP57058 714 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
COPB1-210ENST00000533533 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 KRT26Q7Z3Y9 468 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 MIER1Q8N108 512 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 COL4A1P02462 1669 aa11.24□□□□□ -0.61
COPB1-210ENST00000533533 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 ECE2O60344 883 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 EGFRP00533 1210 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 GPSM2P81274 684 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 MLLT1Q03111 559 aaPredicted RBP11.23□□□□□ -0.61
COPB1-210ENST00000533533 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
COPB1-210ENST00000533533 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
COPB1-210ENST00000533533 EYA3Q99504 573 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 MCOLN1Q9GZU1 580 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 KCNQ5Q9NR82 932 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
COPB1-210ENST00000533533 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 GNAI1P63096 354 aa11.22□□□□□ -0.61
COPB1-210ENST00000533533 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
COPB1-210ENST00000533533 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
COPB1-210ENST00000533533 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
COPB1-210ENST00000533533 DCPSQ96C86 337 aaKnown RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
COPB1-210ENST00000533533 GBA2Q9HCG7 927 aaPredicted RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
COPB1-210ENST00000533533 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
COPB1-210ENST00000533533 RGMBQ6NW40 437 aa11.21□□□□□ -0.61
COPB1-210ENST00000533533 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
COPB1-210ENST00000533533 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.61
COPB1-210ENST00000533533 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
COPB1-210ENST00000533533 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
COPB1-210ENST00000533533 IFT57Q9NWB7 429 aa11.21□□□□□ -0.61
COPB1-210ENST00000533533 PSME4Q14997 1843 aa11.21□□□□□ -0.62
COPB1-210ENST00000533533 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
COPB1-210ENST00000533533 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
COPB1-210ENST00000533533 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
COPB1-210ENST00000533533 DGKZQ13574 1117 aa11.2□□□□□ -0.62
COPB1-210ENST00000533533 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
COPB1-210ENST00000533533 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
COPB1-210ENST00000533533 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
COPB1-210ENST00000533533 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
COPB1-210ENST00000533533 ELL2O00472 640 aaPredicted RBP11.19□□□□□ -0.62
COPB1-210ENST00000533533 SLC34A2O95436 690 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 ZNF157P51786 506 aaPredicted RBP11.19□□□□□ -0.62
COPB1-210ENST00000533533 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 TSR2Q969E8 191 aaKnown RBP11.19□□□□□ -0.62
COPB1-210ENST00000533533 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 ANKIB1Q9P2G1 1089 aa11.19□□□□□ -0.62
COPB1-210ENST00000533533 G3V3G9 751 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 UFL1O94874 794 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 ZNF853P0CG23 659 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 KIF23Q02241 960 aaPredicted RBP11.18□□□□□ -0.62
COPB1-210ENST00000533533 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 PHAXQ9H814 394 aaKnown RBP11.18□□□□□ -0.62
COPB1-210ENST00000533533 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 ZNF609O15014 1411 aa11.18□□□□□ -0.62
COPB1-210ENST00000533533 MYH3P11055 1940 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
COPB1-210ENST00000533533 PCCAP05165 728 aaPredicted RBP11.17□□□□□ -0.62
COPB1-210ENST00000533533 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
COPB1-210ENST00000533533 CCDC152Q4G0S7 254 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
COPB1-210ENST00000533533 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 MYD88Q99836 296 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
COPB1-210ENST00000533533 XDHP47989 1333 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 PDE8AO60658 829 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 TRPA1O75762 1119 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 SLC10A3P09131 477 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 SCARF1Q14162 830 aa11.16□□□□□ -0.62
COPB1-210ENST00000533533 ANGEL2Q5VTE6 544 aaKnown RBP11.16□□□□□ -0.62
COPB1-210ENST00000533533 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms