RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 FPGT-TNNI3KV9GXZ4 949 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
RAD50-209ENST00000533482 SSH3Q8TE77 659 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
RAD50-209ENST00000533482 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 FAM135BQ49AJ0 1406 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 TSPY2A6NKD2 308 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 HOXB7P09629 217 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 TNNT3P45378 269 aaPredicted RBP14.42□□□□□ -0.1
RAD50-209ENST00000533482 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 SLC4A4Q9Y6R1 1079 aa14.42□□□□□ -0.1
RAD50-209ENST00000533482 RAD50Q92878 1312 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 TNNT1P13805 278 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 ITGA6P23229 1130 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 ZNF444Q8N0Y2 327 aaPredicted RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 EAF2Q96CJ1 260 aaPredicted RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 NCOA5Q9HCD5 579 aaKnown RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 NOL7Q9UMY1 257 aaKnown RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 IQGAP3Q86VI3 1631 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 EYA2O00167 538 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 SLC27A2O14975 620 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 RRP9O43818 475 aaKnown RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 KRT18P05783 430 aaKnown RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 PTPN14Q15678 1187 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 CNNM3Q8NE01 707 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 NSFL1CQ9UNZ2 370 aaKnown RBP14.41□□□□□ -0.1
RAD50-209ENST00000533482 PTH1RQ03431 593 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 TMX1Q9H3N1 280 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
RAD50-209ENST00000533482 ZNF622Q969S3 477 aaKnown RBP eCLIP14.41□□□□□ -0.16e-7■■■□□ 15.2
RAD50-209ENST00000533482 ADCY10Q96PN6 1610 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 NEURL1BA8MQ27 555 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 SMTNL1A8MU46 457 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 PRC1O43663 620 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 HSPA4P34932 840 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 GPS2Q13227 327 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 LUZP1Q86V48 1076 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
RAD50-209ENST00000533482 CPLX3Q8WVH0 158 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 WASF1Q92558 559 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 ZKSCAN3Q9BRR0 538 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 PRDM10Q9NQV6 1147 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 NLRP1Q9C000 1473 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 TET3O43151 1660 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 FAM200AQ8TCP9 573 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 ZSCAN16Q9H4T2 348 aaPredicted RBP14.4□□□□□ -0.1
RAD50-209ENST00000533482 BABAM1Q9NWV8 329 aa14.4□□□□□ -0.1
RAD50-209ENST00000533482 PTPDC1A2A3K4 754 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 GNPATO15228 680 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 UQCRFS1P1P0C7P4 283 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 TYRO3Q06418 890 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 SSRP1Q08945 709 aaKnown RBP14.39□□□□□ -0.11
RAD50-209ENST00000533482 CEP89Q96ST8 783 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 OFD1O75665 1012 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 OTUD7BQ6GQQ9 843 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 TMC6Q7Z403 805 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 RNF113AO15541 343 aaKnown RBP14.39□□□□□ -0.11
RAD50-209ENST00000533482 KCNQ4P56696 695 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 DHX32Q7L7V1 743 aaKnown RBP14.39□□□□□ -0.11
RAD50-209ENST00000533482 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 A2ML1A8K2U0 1454 aa14.39□□□□□ -0.11
RAD50-209ENST00000533482 RNF41Q9H4P4 317 aaPredicted RBP14.38□□□□□ -0.11
RAD50-209ENST00000533482 MAGEC2Q9UBF1 373 aaPredicted RBP14.38□□□□□ -0.11
RAD50-209ENST00000533482 CTAGE5O15320 804 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 CBX1P83916 185 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 NOLC1Q14978 699 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAD50-209ENST00000533482 UVSSAQ2YD98 709 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 FAM182BQ5T319 152 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 TRMT1LQ7Z2T5 733 aaKnown RBP14.38□□□□□ -0.11
RAD50-209ENST00000533482 SEC62Q99442 399 aaKnown RBP14.38□□□□□ -0.11
RAD50-209ENST00000533482 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 AXIN2Q9Y2T1 843 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 JAK2O60674 1132 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 STX1AQ16623 288 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 ZFYP08048 801 aaPredicted RBP14.38□□□□□ -0.11
RAD50-209ENST00000533482 EPS15P42566 896 aa14.38□□□□□ -0.11
RAD50-209ENST00000533482 ZBTB43O43298 467 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 CBFA2T2O43439 604 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 NLRP5P59047 1200 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 CATIPQ7Z7H3 387 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
RAD50-209ENST00000533482 CAGE1Q8TC20 777 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 DACH1Q9UI36 760 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 NAA16Q6N069 864 aaPredicted RBP14.37□□□□□ -0.11
RAD50-209ENST00000533482 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 SMARCE1Q969G3 411 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 XAGE2Q96GT9 111 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 MAP3K4Q9Y6R4 1608 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 CFAP74Q9C0B2 1584 aa14.37□□□□□ -0.11
RAD50-209ENST00000533482 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
RAD50-209ENST00000533482 A0A0D9SFI3 127 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms