RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	CCDC57	Q2TAC2	916 aa		28.04	■■■□□ 2.08
SIPA1-208	ENST00000533361	TAF7L	Q5H9L4	462 aa		28.04	■■■□□ 2.08
SIPA1-208	ENST00000533361	TBC1D16	Q8TBP0	767 aa		28.04	■■■□□ 2.08
SIPA1-208	ENST00000533361	GGA1	Q9UJY5	639 aa		28.04	■■■□□ 2.08
SIPA1-208	ENST00000533361	UFL1	O94874	794 aa		28.03	■■■□□ 2.08
SIPA1-208	ENST00000533361	USP44	Q9H0E7	712 aa		28.03	■■■□□ 2.08
SIPA1-208	ENST00000533361	PODXL2	Q9NZ53	605 aa		28.03	■■■□□ 2.08
SIPA1-208	ENST00000533361	MINPP1	Q9UNW1	487 aa		28.03	■■■□□ 2.08
SIPA1-208	ENST00000533361	GJA3	Q9Y6H8	435 aa		28.03	■■■□□ 2.08
SIPA1-208	ENST00000533361	XDH	P47989	1333 aa		28.02	■■■□□ 2.08
SIPA1-208	ENST00000533361	GPR101	Q96P66	508 aa	Predicted RBP	28.02	■■■□□ 2.08
SIPA1-208	ENST00000533361	ZNRF3	Q9ULT6	936 aa		28.02	■■■□□ 2.08
SIPA1-208	ENST00000533361	COL4A5	P29400	1685 aa		28.01	■■■□□ 2.07
SIPA1-208	ENST00000533361	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.01	■■■□□ 2.07
SIPA1-208	ENST00000533361	SPEF2	Q9C093	1822 aa		28.01	■■■□□ 2.07
SIPA1-208	ENST00000533361		G3V3G9	751 aa		28	■■■□□ 2.07
SIPA1-208	ENST00000533361	DCAF8	Q5TAQ9	597 aa		28	■■■□□ 2.07
SIPA1-208	ENST00000533361	ATF7IP	Q6VMQ6	1270 aa		28	■■■□□ 2.07
SIPA1-208	ENST00000533361	KAZALD1	Q96I82	304 aa		28	■■■□□ 2.07
SIPA1-208	ENST00000533361	BICC1	Q9H694	974 aa	Known RBP	28	■■■□□ 2.07
SIPA1-208	ENST00000533361	DUOX1	Q9NRD9	1551 aa		27.99	■■■□□ 2.07
SIPA1-208	ENST00000533361	TOMM70	O94826	608 aa		27.99	■■■□□ 2.07
SIPA1-208	ENST00000533361	ATP2B4	P23634	1241 aa		27.99	■■■□□ 2.07
SIPA1-208	ENST00000533361	ZKSCAN2	Q63HK3	967 aa		27.99	■■■□□ 2.07
SIPA1-208	ENST00000533361	GPC2	Q8N158	579 aa		27.99	■■■□□ 2.07
SIPA1-208	ENST00000533361	CLUAP1	Q96AJ1	413 aa		27.98	■■■□□ 2.07
SIPA1-208	ENST00000533361	ZNF594	Q96JF6	807 aa	Predicted RBP	27.98	■■■□□ 2.07
SIPA1-208	ENST00000533361	ANKRD2	Q9GZV1	360 aa		27.98	■■■□□ 2.07
SIPA1-208	ENST00000533361	POTEC	B2RU33	542 aa		27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	UBTFL1	P0CB47	393 aa	Predicted RBP	27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	TRIM27	P14373	513 aa		27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	DOK7	Q18PE1	504 aa		27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	DBNDD1	Q9H9R9	158 aa		27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	TNN	Q9UQP3	1299 aa		27.97	■■■□□ 2.07
SIPA1-208	ENST00000533361	WDR90	Q96KV7	1748 aa		27.96	■■■□□ 2.07
SIPA1-208	ENST00000533361	IQCA1L	A6NCM1	817 aa		27.96	■■■□□ 2.07
SIPA1-208	ENST00000533361	CXCL9	Q07325	125 aa		27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	INTS3	Q68E01	1043 aa	Known RBP	27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	LDHAL6A	Q6ZMR3	332 aa		27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	ANKRD44	Q8N8A2	993 aa		27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	CNNM1	Q9NRU3	951 aa		27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	HDAC5	Q9UQL6	1122 aa		27.95	■■■□□ 2.06
SIPA1-208	ENST00000533361	RAD17	O75943	681 aa		27.94	■■■□□ 2.06
SIPA1-208	ENST00000533361	KCNJ4	P48050	445 aa		27.94	■■■□□ 2.06
SIPA1-208	ENST00000533361	CHRND	Q07001	517 aa		27.94	■■■□□ 2.06
SIPA1-208	ENST00000533361	CIAPIN1	Q6FI81	312 aa		27.94	■■■□□ 2.06
SIPA1-208	ENST00000533361	LTBP1	Q14766	1721 aa		27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	ECE2	O60344	883 aa		27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	TNIP1	Q15025	636 aa		27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	RABL6	Q3YEC7	729 aa	Predicted RBP	27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	HACL1	Q9UJ83	578 aa		27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	LEMD3	Q9Y2U8	911 aa		27.93	■■■□□ 2.06
SIPA1-208	ENST00000533361	WTIP	A6NIX2	430 aa	Predicted RBP	27.92	■■■□□ 2.06
SIPA1-208	ENST00000533361	PLIN1	O60240	522 aa		27.92	■■■□□ 2.06
SIPA1-208	ENST00000533361	LMOD1	P29536	600 aa	Predicted RBP	27.92	■■■□□ 2.06
SIPA1-208	ENST00000533361	HELB	Q8NG08	1087 aa	Predicted RBP	27.92	■■■□□ 2.06
SIPA1-208	ENST00000533361	RBM46	Q8TBY0	533 aa	Known RBP	27.92	■■■□□ 2.06
SIPA1-208	ENST00000533361	YDJC	A8MPS7	323 aa		27.91	■■■□□ 2.06
SIPA1-208	ENST00000533361	YTHDC1	Q96MU7	727 aa	Known RBP	27.91	■■■□□ 2.06
SIPA1-208	ENST00000533361	MEIS3	Q99687	375 aa		27.91	■■■□□ 2.06
SIPA1-208	ENST00000533361	ZNF804B	A4D1E1	1349 aa		27.91	■■■□□ 2.06
SIPA1-208	ENST00000533361	TAF5L	O75529	589 aa		27.9	■■■□□ 2.06
SIPA1-208	ENST00000533361	FTSJ3	Q8IY81	847 aa	Known RBP	27.9	■■■□□ 2.06
SIPA1-208	ENST00000533361	GNAI3	P08754	354 aa		27.89	■■■□□ 2.06
SIPA1-208	ENST00000533361	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.89	■■■□□ 2.06
SIPA1-208	ENST00000533361	LRRFIP2	Q9Y608	721 aa	Known RBP	27.89	■■■□□ 2.06
SIPA1-208	ENST00000533361	EPHX2	P34913	555 aa		27.88	■■■□□ 2.05
SIPA1-208	ENST00000533361	EAPP	Q56P03	285 aa	Predicted RBP	27.88	■■■□□ 2.05
SIPA1-208	ENST00000533361	TMEM57	Q8N5G2	664 aa		27.88	■■■□□ 2.05
SIPA1-208	ENST00000533361	PUS3	Q9BZE2	481 aa	Known RBP	27.88	■■■□□ 2.05
SIPA1-208	ENST00000533361	DZIP1L	Q8IYY4	767 aa	Known RBP	27.87	■■■□□ 2.05
SIPA1-208	ENST00000533361	SMC1B	Q8NDV3	1235 aa		27.87	■■■□□ 2.05
SIPA1-208	ENST00000533361	KCNQ5	Q9NR82	932 aa		27.87	■■■□□ 2.05
SIPA1-208	ENST00000533361	MED23	Q9ULK4	1368 aa		27.86	■■■□□ 2.05
SIPA1-208	ENST00000533361	SCN4A	P35499	1836 aa		27.86	■■■□□ 2.05
SIPA1-208	ENST00000533361	GMPS	P49915	693 aa	Predicted RBP	27.86	■■■□□ 2.05
SIPA1-208	ENST00000533361	APLP1	P51693	650 aa		27.86	■■■□□ 2.05
SIPA1-208	ENST00000533361	CLEC11A	Q9Y240	323 aa		27.86	■■■□□ 2.05
SIPA1-208	ENST00000533361	PSMD14	O00487	310 aa		27.85	■■■□□ 2.05
SIPA1-208	ENST00000533361	EPS15	P42566	896 aa		27.85	■■■□□ 2.05
SIPA1-208	ENST00000533361	KLHDC4	Q8TBB5	520 aa		27.85	■■■□□ 2.05
SIPA1-208	ENST00000533361	RCAN3	Q9UKA8	241 aa		27.85	■■■□□ 2.05
SIPA1-208	ENST00000533361	SNAP23	O00161	211 aa		27.84	■■■□□ 2.05
SIPA1-208	ENST00000533361	SCNN1D	P51172	638 aa		27.84	■■■□□ 2.05
SIPA1-208	ENST00000533361	FSTL1	Q12841	308 aa		27.84	■■■□□ 2.05
SIPA1-208	ENST00000533361	PODN	Q7Z5L7	613 aa		27.83	■■■□□ 2.05
SIPA1-208	ENST00000533361	PNMA8A	Q86V59	439 aa	Predicted RBP	27.83	■■■□□ 2.05
SIPA1-208	ENST00000533361	TXNRD3	Q86VQ6	643 aa		27.83	■■■□□ 2.05
SIPA1-208	ENST00000533361	POTEI	P0CG38	1075 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	POTEJ	P0CG39	1038 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	LRRC24	Q50LG9	513 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	ITPRIP	Q8IWB1	547 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	COA1	Q9GZY4	146 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	GPRC5D	Q9NZD1	345 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	MROH5	Q6ZUA9	1318 aa		27.82	■■■□□ 2.04
SIPA1-208	ENST00000533361	KLRK1	P26718	216 aa		27.81	■■■□□ 2.04
SIPA1-208	ENST00000533361	METTL24	Q5JXM2	366 aa		27.81	■■■□□ 2.04
SIPA1-208	ENST00000533361	CHADL	Q6NUI6	762 aa		27.81	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms