RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 C9orf78Q9NZ63 289 aaPredicted RBP12.45□□□□□ -0.42
NUP98-220ENST00000533346 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
NUP98-220ENST00000533346 XDHP47989 1333 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 ITGA6P23229 1130 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 APLP1P51693 650 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
NUP98-220ENST00000533346 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 USP44Q9H0E7 712 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 ZNF609O15014 1411 aa12.44□□□□□ -0.42
NUP98-220ENST00000533346 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 CAPN15O75808 1086 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
NUP98-220ENST00000533346 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
NUP98-220ENST00000533346 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
NUP98-220ENST00000533346 CXCL9Q07325 125 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 ANKRD2Q9GZV1 360 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
NUP98-220ENST00000533346 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
NUP98-220ENST00000533346 LEMD3Q9Y2U8 911 aa12.43□□□□□ -0.42
NUP98-220ENST00000533346 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 IFIT5Q13325 482 aaKnown RBP12.42□□□□□ -0.42
NUP98-220ENST00000533346 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 EPHA10Q5JZY3 1008 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
NUP98-220ENST00000533346 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
NUP98-220ENST00000533346 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
NUP98-220ENST00000533346 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 ZC3H12CQ9C0D7 883 aaKnown RBP12.42□□□□□ -0.42
NUP98-220ENST00000533346 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
NUP98-220ENST00000533346 ZNF646O15015 1829 aaPredicted RBP12.41□□□□□ -0.42
NUP98-220ENST00000533346 SCN9AQ15858 1988 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
NUP98-220ENST00000533346 SCNN1DP51172 638 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 TNIP1Q15025 636 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
NUP98-220ENST00000533346 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 DPF2Q92785 391 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 SUCLG2Q96I99 432 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
NUP98-220ENST00000533346 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
NUP98-220ENST00000533346 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
NUP98-220ENST00000533346 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
NUP98-220ENST00000533346 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
NUP98-220ENST00000533346 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 UFL1O94874 794 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
NUP98-220ENST00000533346 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
NUP98-220ENST00000533346 EPHX2P34913 555 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 USP50Q70EL3 339 aaPredicted RBP12.39□□□□□ -0.43
NUP98-220ENST00000533346 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 PGAP2Q9UHJ9 254 aa12.39□□□□□ -0.43
NUP98-220ENST00000533346 ECE2O60344 883 aa12.38□□□□□ -0.43
NUP98-220ENST00000533346 MMP14P50281 582 aa12.38□□□□□ -0.43
NUP98-220ENST00000533346 CHRNDQ07001 517 aa12.38□□□□□ -0.43
NUP98-220ENST00000533346 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
NUP98-220ENST00000533346 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
NUP98-220ENST00000533346 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
NUP98-220ENST00000533346 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 BCAR3O75815 825 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 TRIM27P14373 513 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
NUP98-220ENST00000533346 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
NUP98-220ENST00000533346 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
NUP98-220ENST00000533346 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
NUP98-220ENST00000533346 PSMD14O00487 310 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
NUP98-220ENST00000533346 EPS15P42566 896 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 RFX5P48382 616 aaPredicted RBP12.36□□□□□ -0.43
NUP98-220ENST00000533346 UBE4AQ14139 1066 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 KLRG1Q96E93 195 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
NUP98-220ENST00000533346 ZBTB22O15209 634 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 RAD17O75943 681 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 POTEJP0CG39 1038 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 GMPSP49915 693 aaPredicted RBP12.35□□□□□ -0.43
NUP98-220ENST00000533346 MTX1Q13505 466 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 GMLQ99445 158 aa12.35□□□□□ -0.43
NUP98-220ENST00000533346 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
NUP98-220ENST00000533346 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms