RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 ZBTB12Q9Y330 459 aaPredicted RBP25.26■■□□□ 1.63
GRAMD1B-209ENST00000533341 RASSF10A6NK89 507 aa25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 PSMD14O00487 310 aa25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 IGKV5-2P06315 115 aa25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 CWF19L2Q2TBE0 894 aaKnown RBP25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 MICALL2Q8IY33 904 aa25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 GGA1Q9UJY5 639 aa25.25■■□□□ 1.63
GRAMD1B-209ENST00000533341 FANCIQ9NVI1 1328 aa25.24■■□□□ 1.63
GRAMD1B-209ENST00000533341 WDR63Q8IWG1 891 aa25.24■■□□□ 1.63
GRAMD1B-209ENST00000533341 CDC5LQ99459 802 aaKnown RBP25.24■■□□□ 1.63
GRAMD1B-209ENST00000533341 PODXL2Q9NZ53 605 aa25.24■■□□□ 1.63
GRAMD1B-209ENST00000533341 PCNTO95613 3336 aa25.23■■□□□ 1.63
GRAMD1B-209ENST00000533341 CTSWP56202 376 aa25.23■■□□□ 1.63
GRAMD1B-209ENST00000533341 FKBP5Q13451 457 aaPredicted RBP25.23■■□□□ 1.63
GRAMD1B-209ENST00000533341 FAM9BQ8IZU0 186 aa25.23■■□□□ 1.63
GRAMD1B-209ENST00000533341 MYH3P11055 1940 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 WDR33Q9C0J8 1336 aaKnown RBP25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 SHTN1A0MZ66 631 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 NEURL1BA8MQ27 555 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 FLIIQ13045 1269 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 GRM1Q13255 1194 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 TRPM4Q8TD43 1214 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 ZC3H15Q8WU90 426 aaKnown RBP25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 DPF2Q92785 391 aa25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 GLIS2Q9BZE0 524 aaPredicted RBP25.22■■□□□ 1.63
GRAMD1B-209ENST00000533341 HIRAP54198 1017 aaPredicted RBP25.21■■□□□ 1.63
GRAMD1B-209ENST00000533341 ZNF408Q9H9D4 720 aa25.21■■□□□ 1.63
GRAMD1B-209ENST00000533341 KCNQ5Q9NR82 932 aa25.21■■□□□ 1.63
GRAMD1B-209ENST00000533341 CACNA1FO60840 1977 aa25.2■■□□□ 1.63
GRAMD1B-209ENST00000533341 XDHP47989 1333 aa25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 RPS12P25398 132 aaKnown RBP25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 ECE1P42892 770 aa25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 EXOSC9Q06265 439 aaKnown RBP25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 RBM26Q5T8P6 1007 aaKnown RBP25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 CST9Q5W186 159 aa25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 CDC37L1Q7L3B6 337 aa25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 UBE3BQ7Z3V4 1068 aa25.2■■□□□ 1.62
GRAMD1B-209ENST00000533341 FOXN1O15353 648 aa25.19■■□□□ 1.62
GRAMD1B-209ENST00000533341 SAMD7Q7Z3H4 446 aa25.19■■□□□ 1.62
GRAMD1B-209ENST00000533341 TTLL11Q8NHH1 800 aa25.19■■□□□ 1.62
GRAMD1B-209ENST00000533341 MYH16Q9H6N6 1097 aa25.19■■□□□ 1.62
GRAMD1B-209ENST00000533341 PGAP2Q9UHJ9 254 aa25.19■■□□□ 1.62
GRAMD1B-209ENST00000533341 VAMP4O75379 141 aa25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 ATP2B4P23634 1241 aa25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 TBC1D10BQ4KMP7 808 aaPredicted RBP25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 DNAAF4Q8WXU2 420 aa25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 GREM2Q9H772 168 aa25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
GRAMD1B-209ENST00000533341 H7C1W4 665 aa25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 CAPN15O75808 1086 aa25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 CTCFP49711 727 aaPredicted RBP25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 CAPNS2Q96L46 248 aa25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 TLL2Q9Y6L7 1015 aa25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 RTL9Q8NET4 1388 aa25.17■■□□□ 1.62
GRAMD1B-209ENST00000533341 MAP2K1Q02750 393 aaPredicted RBP25.16■■□□□ 1.62
GRAMD1B-209ENST00000533341 GCKRQ14397 625 aa25.16■■□□□ 1.62
GRAMD1B-209ENST00000533341 CYP4F22Q6NT55 531 aa25.16■■□□□ 1.62
GRAMD1B-209ENST00000533341 IGHMBP2P38935 993 aaKnown RBP25.15■■□□□ 1.62
GRAMD1B-209ENST00000533341 USP48Q86UV5 1035 aa25.15■■□□□ 1.62
GRAMD1B-209ENST00000533341 BSDC1Q9NW68 430 aaPredicted RBP25.15■■□□□ 1.62
GRAMD1B-209ENST00000533341 WBP1LQ9NX94 342 aa25.15■■□□□ 1.62
GRAMD1B-209ENST00000533341 VIL1P09327 827 aaKnown RBP25.14■■□□□ 1.62
GRAMD1B-209ENST00000533341 LINS1Q8NG48 757 aa25.14■■□□□ 1.62
GRAMD1B-209ENST00000533341 DCPSQ96C86 337 aaKnown RBP25.14■■□□□ 1.62
GRAMD1B-209ENST00000533341 SCN9AQ15858 1988 aa25.14■■□□□ 1.61
GRAMD1B-209ENST00000533341 BEGAINQ9BUH8 593 aa25.13■■□□□ 1.61
GRAMD1B-209ENST00000533341 MINPP1Q9UNW1 487 aa25.13■■□□□ 1.61
GRAMD1B-209ENST00000533341 KIF4BQ2VIQ3 1234 aa25.12■■□□□ 1.61
GRAMD1B-209ENST00000533341 MPHOSPH8Q99549 860 aa25.12■■□□□ 1.61
GRAMD1B-209ENST00000533341 POLR2AP24928 1970 aaKnown RBP25.12■■□□□ 1.61
GRAMD1B-209ENST00000533341 EGFRP00533 1210 aa25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 KRT26Q7Z3Y9 468 aa25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 SAPCD2Q86UD0 394 aa25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 SPINK5Q9NQ38 1064 aaPredicted RBP25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 PRDM10Q9NQV6 1147 aa25.11■■□□□ 1.61
GRAMD1B-209ENST00000533341 ITGA6P23229 1130 aa25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 CCT4P50991 539 aaKnown RBP25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 LBX1P52954 281 aa25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 RSBN1LQ6PCB5 846 aaPredicted RBP25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 PODNQ7Z5L7 613 aa25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 AGBL3Q8NEM8 1001 aa25.1■■□□□ 1.61
GRAMD1B-209ENST00000533341 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
GRAMD1B-209ENST00000533341 FBXW7Q969H0 707 aa25.09■■□□□ 1.61
GRAMD1B-209ENST00000533341 USP17L3A6NCW0 530 aa25.08■■□□□ 1.61
GRAMD1B-209ENST00000533341 USP17L4A6NCW7 530 aa25.08■■□□□ 1.61
GRAMD1B-209ENST00000533341 F6X3S4 739 aa25.08■■□□□ 1.61
GRAMD1B-209ENST00000533341 USP17L1Q7RTZ2 530 aa25.08■■□□□ 1.61
GRAMD1B-209ENST00000533341 CHMP3Q9Y3E7 222 aa25.08■■□□□ 1.61
GRAMD1B-209ENST00000533341 PSME4Q14997 1843 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 MED23Q9ULK4 1368 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 WTIPA6NIX2 430 aaPredicted RBP25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 AOC2O75106 756 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 CASP7P55210 303 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 DLK2Q6UY11 383 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 ANKRD2Q9GZV1 360 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 LEMD3Q9Y2U8 911 aa25.07■■□□□ 1.6
GRAMD1B-209ENST00000533341 ANKRD18BA2A2Z9 1011 aa25.06■■□□□ 1.6
GRAMD1B-209ENST00000533341 ADM5C9JUS6 153 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms