RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
CACNA1E-208ENST00000533229 ABCA3Q99758 1704 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 TCHHQ07283 1943 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 IFIT1P09914 478 aaKnown RBP18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 Q6ZUG5 572 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
CACNA1E-208ENST00000533229 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 HELLSQ9NRZ9 838 aa18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 PHF14O94880 888 aa18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 ZSCAN30Q86W11 494 aa18.23■□□□□ 0.51
CACNA1E-208ENST00000533229 JAK2O60674 1132 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 ADORA1P30542 326 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 HLFQ16534 295 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 CEP126Q9P2H0 1117 aa18.22■□□□□ 0.51
CACNA1E-208ENST00000533229 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
CACNA1E-208ENST00000533229 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
CACNA1E-208ENST00000533229 TTC6Q86TZ1 520 aa18.21■□□□□ 0.51
CACNA1E-208ENST00000533229 BRF1Q92994 677 aa18.21■□□□□ 0.51
CACNA1E-208ENST00000533229 MAST3O60307 1309 aa18.21■□□□□ 0.51
CACNA1E-208ENST00000533229 CSF1RP07333 972 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 PDCP20941 246 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 RNF113AO15541 343 aaKnown RBP18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 STARD3NLO95772 234 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
CACNA1E-208ENST00000533229 M0R2C6 588 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 GPTP24298 496 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 SCRN1Q12765 414 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 SCARF1Q14162 830 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 HS1BP3Q53T59 392 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 GIGYF2Q6Y7W6 1299 aaKnown RBP18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 OSBP2Q969R2 916 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
CACNA1E-208ENST00000533229 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
CACNA1E-208ENST00000533229 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
CACNA1E-208ENST00000533229 KRT85P78386 507 aa18.18■□□□□ 0.5
CACNA1E-208ENST00000533229 DHX32Q7L7V1 743 aaKnown RBP18.18■□□□□ 0.5
CACNA1E-208ENST00000533229 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
CACNA1E-208ENST00000533229 EXOSC10Q01780 885 aaKnown RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 NOL7Q9UMY1 257 aaKnown RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 E7EWF7 191 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 FOXP2O15409 715 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 LETM1O95202 739 aaPredicted RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 CCDC158Q5M9N0 1113 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 PI16Q6UXB8 463 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 NLRP10Q86W26 655 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 TFIP11Q9UBB9 837 aaKnown RBP18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 FBXO3Q9UK99 471 aa18.17■□□□□ 0.5
CACNA1E-208ENST00000533229 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 AKAP2Q9Y2D5 859 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 BCL9O00512 1426 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 HMGB1P09429 215 aaKnown RBP18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 APOBRQ0VD83 1088 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 GORABQ5T7V8 394 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 GREM2Q9H772 168 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 RIPOR2Q9Y4F9 1068 aa18.16■□□□□ 0.5
CACNA1E-208ENST00000533229 NHSL1Q5SYE7 1610 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 PFKFB2O60825 505 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 MSNP26038 577 aaKnown RBP18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 ZAP70P43403 619 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 FGD1P98174 961 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 ELP1O95163 1332 aa18.15■□□□□ 0.5
CACNA1E-208ENST00000533229 ITGA6P23229 1130 aa18.14■□□□□ 0.5
CACNA1E-208ENST00000533229 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.5
CACNA1E-208ENST00000533229 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.5
CACNA1E-208ENST00000533229 SYTL4Q96C24 671 aaPredicted RBP18.14■□□□□ 0.5
CACNA1E-208ENST00000533229 LIG1P18858 919 aa18.14■□□□□ 0.49
CACNA1E-208ENST00000533229 HSP90AB3PQ58FF7 597 aa18.14■□□□□ 0.49
CACNA1E-208ENST00000533229 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
CACNA1E-208ENST00000533229 RESTQ13127 1097 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms