RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 MRFAP1L1Q96HT8 127 aa17.41■□□□□ 0.38
CAPN1-224ENST00000533129 IGSF3O75054 1194 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 NR1I2O75469 434 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 IL2RBP14784 551 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 LARP1Q6PKG0 1096 aaKnown RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 SLFN14P0C7P3 912 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 NAA30Q147X3 362 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
CAPN1-224ENST00000533129 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
CAPN1-224ENST00000533129 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
CAPN1-224ENST00000533129 RPS6KB1P23443 525 aa17.39■□□□□ 0.37
CAPN1-224ENST00000533129 NYAP1Q6ZVC0 841 aa17.39■□□□□ 0.37
CAPN1-224ENST00000533129 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-224ENST00000533129 ZNF790Q6PG37 636 aa17.39■□□□□ 0.37
CAPN1-224ENST00000533129 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
CAPN1-224ENST00000533129 IQCB1Q15051 598 aa17.38■□□□□ 0.37
CAPN1-224ENST00000533129 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
CAPN1-224ENST00000533129 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
CAPN1-224ENST00000533129 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-224ENST00000533129 JCADQ9P266 1359 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-224ENST00000533129 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 CHPF2Q9P2E5 772 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-224ENST00000533129 MYH15Q9Y2K3 1946 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-224ENST00000533129 TOM1O60784 492 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 PTPN14Q15678 1187 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 KCND1Q9NSA2 647 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 FAM53CQ9NYF3 392 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
CAPN1-224ENST00000533129 ERO1AQ96HE7 468 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 ADCY9O60503 1353 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 CTAGE5O15320 804 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 RESTQ13127 1097 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 TERF2Q15554 542 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 TSGA10IPQ3SY00 556 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 ZNF592Q92610 1267 aa17.36■□□□□ 0.37
CAPN1-224ENST00000533129 COL9A3Q14050 684 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-224ENST00000533129 STX1AQ16623 288 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 KMT5BQ4FZB7 885 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 ZNF215Q9UL58 517 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-224ENST00000533129 CABP4P57796 275 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-224ENST00000533129 AACSQ86V21 672 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 ZSCAN16Q9H4T2 348 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-224ENST00000533129 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
CAPN1-224ENST00000533129 USP27XA6NNY8 438 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 SKILP12757 684 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 FAM193AP78312 1265 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 KIF2AO00139 706 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-224ENST00000533129 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 SLC39A6Q13433 755 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 GTF3C6Q969F1 213 aa17.34■□□□□ 0.37
CAPN1-224ENST00000533129 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
CAPN1-224ENST00000533129 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
CAPN1-224ENST00000533129 CCZ1BP86790 482 aa17.33■□□□□ 0.36
CAPN1-224ENST00000533129 CCZ1P86791 482 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-224ENST00000533129 C11orf57Q6ZUT1 292 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-224ENST00000533129 TCEANC2Q96MN5 208 aa17.33■□□□□ 0.36
CAPN1-224ENST00000533129 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 KRT32Q14532 448 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 CREBRFQ8IUR6 639 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
CAPN1-224ENST00000533129 ARID5BQ14865 1188 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 BRF1Q92994 677 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 C5P01031 1676 aa17.32■□□□□ 0.36
CAPN1-224ENST00000533129 SLU7O95391 586 aaKnown RBP17.31■□□□□ 0.36
CAPN1-224ENST00000533129 STK3Q13188 491 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 FBXO38Q6PIJ6 1188 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
CAPN1-224ENST00000533129 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
CAPN1-224ENST00000533129 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-224ENST00000533129 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 DISP2A7MBM2 1401 aa17.31■□□□□ 0.36
CAPN1-224ENST00000533129 BECN2A8MW95 431 aa17.3■□□□□ 0.36
CAPN1-224ENST00000533129 H3BQV1 296 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms