RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	CNBD1	Q8NA66	436 aa		10.51	□□□□□ -0.73
PUM1-223	ENST00000532678	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.51	□□□□□ -0.73
PUM1-223	ENST00000532678	FECH	P22830	423 aa		10.5	□□□□□ -0.73
PUM1-223	ENST00000532678	IFFO2	Q5TF58	517 aa		10.5	□□□□□ -0.73
PUM1-223	ENST00000532678	DNAJC5G	Q8N7S2	189 aa		10.5	□□□□□ -0.73
PUM1-223	ENST00000532678	SETDB2	Q96T68	719 aa		10.5	□□□□□ -0.73
PUM1-223	ENST00000532678	BRIP1	Q9BX63	1249 aa		10.5	□□□□□ -0.73
PUM1-223	ENST00000532678	GLTPD2	A6NH11	291 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	PDE6B	P35913	854 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	ST5	P78524	1137 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	PRPF40B	Q6NWY9	871 aa	Known RBP	10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	NUDT18	Q6ZVK8	323 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	NPM2	Q86SE8	214 aa	Known RBP	10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	ABCC12	Q96J65	1359 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	NUP98	P52948	1817 aa		10.49	□□□□□ -0.73
PUM1-223	ENST00000532678	C3orf80	F5H4A9	247 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	SNRPA1	P09661	255 aa	Known RBP	10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	FSTL1	Q12841	308 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	HLF	Q16534	295 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	OLFM4	Q6UX06	510 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	SLC51A	Q86UW1	340 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	NGEF	Q8N5V2	710 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	PNMA3	Q9UL41	463 aa		10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.48	□□□□□ -0.73
PUM1-223	ENST00000532678	POTEC	B2RU33	542 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	IRF6	O14896	467 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	SRGN	P10124	158 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	TAF7	Q15545	349 aa	Predicted RBP	10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	ERFE	Q4G0M1	354 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	SMC1B	Q8NDV3	1235 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	PXYLP1	Q8TE99	480 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	TAOK3	Q9H2K8	898 aa		10.47	□□□□□ -0.73
PUM1-223	ENST00000532678	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.47	□□□□□ -0.73	2e-60	■■■■■ 52.7
PUM1-223	ENST00000532678	MMRN1	Q13201	1228 aa		10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	STYK1	Q6J9G0	422 aa		10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	KLRG1	Q96E93	195 aa		10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	MASTL	Q96GX5	879 aa		10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	ZFR	Q96KR1	1074 aa	Known RBP	10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	TSPYL4	Q9UJ04	414 aa		10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	SALL2	Q9Y467	1007 aa	Predicted RBP	10.46	□□□□□ -0.73
PUM1-223	ENST00000532678	DDN	O94850	711 aa	Predicted RBP	10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	VEGFA	P15692	232 aa	Predicted RBP	10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	CCDC27	Q2M243	656 aa		10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	TTLL7	Q6ZT98	887 aa		10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	METTL3	Q86U44	580 aa	Known RBP	10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	NUTM1	Q86Y26	1132 aa		10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	CNKSR1	Q969H4	720 aa		10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	ZNF652	Q9Y2D9	606 aa		10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	LAS1L	Q9Y4W2	734 aa	Known RBP	10.45	□□□□□ -0.74
PUM1-223	ENST00000532678	ZNF541	Q9H0D2	1346 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	LTBP3	Q9NS15	1303 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	MYL6B	P14649	208 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	CALD1	Q05682	793 aa	Known RBP	10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	WWC1	Q8IX03	1113 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	PDZRN3	Q9UPQ7	1066 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	COL4A5	P29400	1685 aa		10.44	□□□□□ -0.74
PUM1-223	ENST00000532678	UBN2	Q6ZU65	1347 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	GPT	P24298	496 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	EIF4A1	P60842	406 aa	Known RBP	10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	CCDC93	Q567U6	631 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	CLEC4G	Q6UXB4	293 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	ZBTB3	Q9H5J0	574 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	IFT57	Q9NWB7	429 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	BABAM1	Q9NWV8	329 aa		10.43	□□□□□ -0.74
PUM1-223	ENST00000532678	ANKRD36C	Q5JPF3	1778 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	MAP3K15	Q6ZN16	1313 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	GOLGA8CP	A6NN73	597 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	SMAP	O00193	183 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	CHL1	O00533	1208 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	ANXA1	P04083	346 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	ZNF853	P0CG23	659 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	NPR1	P16066	1061 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	DNAJB2	P25686	324 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	ANKK1	Q8NFD2	765 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	C7orf43	Q8WVR3	580 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	RNF166	Q96A37	237 aa	Predicted RBP	10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	MBIP	Q9NS73	344 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	LAMB2	P55268	1798 aa		10.42	□□□□□ -0.74
PUM1-223	ENST00000532678	SNED1	Q8TER0	1413 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	GNAI1	P63096	354 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	TPTE2	Q6XPS3	522 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	JMY	Q8N9B5	988 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	SCN4A	P35499	1836 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	ADAMTSL1	Q8N6G6	1762 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	LTBP1	Q14766	1721 aa		10.41	□□□□□ -0.74
PUM1-223	ENST00000532678	IL16	Q14005	1332 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	ZNF521	Q96K83	1311 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	KLRG2	A4D1S0	409 aa	Predicted RBP	10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	SOWAHB	A6NEL2	793 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	TCERG1	O14776	1098 aa	Known RBP	10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	GTF2E1	P29083	439 aa	Predicted RBP	10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	KRT24	Q2M2I5	525 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	PROSER3	Q2NL68	480 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	SOGA3	Q5TF21	947 aa		10.4	□□□□□ -0.74
PUM1-223	ENST00000532678	KIF6	Q6ZMV9	814 aa		10.4	□□□□□ -0.74

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