RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 MAP3K11Q16584 847 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 TSNARE1Q96NA8 513 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 MPHOSPH6Q99547 160 aaKnown RBP10.05□□□□□ -0.8
CTNND1-232ENST00000532649 GJB2P29033 226 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 WTAPQ15007 396 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 SLC26A6Q9BXS9 759 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 C16orf71Q8IYS4 520 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-232ENST00000532649 PLBD2Q8NHP8 589 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 JDP2Q8WYK2 163 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 KRT23Q9C075 422 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-232ENST00000532649 PTPRTO14522 1441 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 G2E3Q7L622 706 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
CTNND1-232ENST00000532649 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 EIF5P55010 431 aaKnown RBP10.05□□□□□ -0.8
CTNND1-232ENST00000532649 HOOK3Q86VS8 718 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 SPATA24Q86W54 205 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 VEZTQ9HBM0 779 aa10.05□□□□□ -0.8
CTNND1-232ENST00000532649 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 FERMT1Q9BQL6 677 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 UBA5Q9GZZ9 404 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 RLBP1P12271 317 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 MPNDQ8N594 471 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 ESR2Q92731 530 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 EYA3Q99504 573 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 SMTNL1A8MU46 457 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 A1BGP04217 495 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 IFIT1BQ5T764 474 aaKnown RBP10.04□□□□□ -0.8
CTNND1-232ENST00000532649 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
CTNND1-232ENST00000532649 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-232ENST00000532649 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
CTNND1-232ENST00000532649 RBM8AQ9Y5S9 174 aaKnown RBP10.04□□□□□ -0.8
CTNND1-232ENST00000532649 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 BRF1Q92994 677 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 HECW2Q9P2P5 1572 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 PLEKHG1Q9ULL1 1385 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 CNNM2Q9H8M5 875 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 CTNNA2P26232 953 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 KLHL10Q6JEL2 608 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 CTNNBL1Q8WYA6 563 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 TAF3Q5VWG9 929 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 TRMT1LQ7Z2T5 733 aaKnown RBP10.03□□□□□ -0.8
CTNND1-232ENST00000532649 CCDC113Q9H0I3 377 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 METP08581 1390 aa10.03□□□□□ -0.8
CTNND1-232ENST00000532649 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 SYCE3A1L190 88 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 GCOM1H8Y6P7 765 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-232ENST00000532649 MYZAPP0CAP1 466 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 USP8P40818 1118 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 PREX2Q70Z35 1606 aa10.02□□□□□ -0.8
CTNND1-232ENST00000532649 ITGA6P23229 1130 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 DNAJC10Q8IXB1 793 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 ZBTB43O43298 467 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 LDHBP07195 334 aaKnown RBP10.02□□□□□ -0.81
CTNND1-232ENST00000532649 SSFA2P28290 1259 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 CCDC178Q5BJE1 867 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 GSTTP1A0A1W2PQM5 241 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 ZWINTO95229 277 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 HOXB7P09629 217 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 LIG1P18858 919 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 RNF113AO15541 343 aaKnown RBP10.02□□□□□ -0.81
CTNND1-232ENST00000532649 STX6O43752 255 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
CTNND1-232ENST00000532649 APBA3O96018 575 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 GRM1Q13255 1194 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms