RNA–Protein interactions for RNA: ENST00000531983.1

RBBP4-219, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-219ENST00000531983 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
RBBP4-219ENST00000531983 LMOD1P29536 600 aaPredicted RBP7.47□□□□□ -1.21
RBBP4-219ENST00000531983 EPHX2P34913 555 aa7.47□□□□□ -1.21
RBBP4-219ENST00000531983 PAXIP1Q6ZW49 1069 aaPredicted RBP7.47□□□□□ -1.21
RBBP4-219ENST00000531983 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
RBBP4-219ENST00000531983 CFAP53Q96M91 514 aa7.47□□□□□ -1.21
RBBP4-219ENST00000531983 BEGAINQ9BUH8 593 aa7.47□□□□□ -1.21
RBBP4-219ENST00000531983 ZNF277Q9NRM2 450 aaPredicted RBP7.47□□□□□ -1.21
RBBP4-219ENST00000531983 SMAPO00193 183 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 A1BGP04217 495 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
RBBP4-219ENST00000531983 IARSP41252 1262 aaKnown RBP7.46□□□□□ -1.22
RBBP4-219ENST00000531983 VEGFBP49765 207 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 GPC2Q8N158 579 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 JDP2Q8WYK2 163 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 RTF1Q92541 710 aaKnown RBP7.46□□□□□ -1.22
RBBP4-219ENST00000531983 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 NIP7Q9Y221 180 aaKnown RBP eCLIP7.46□□□□□ -1.22
RBBP4-219ENST00000531983 NPC1L1Q9UHC9 1359 aa7.46□□□□□ -1.22
RBBP4-219ENST00000531983 RIC1Q4ADV7 1423 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 LTBP1Q14766 1721 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 FAM177BA6PVY3 158 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 PRKAR2BP31323 418 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 PIP4K2AP48426 406 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 LBX1P52954 281 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 PRSS12P56730 875 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 MAP2K1Q02750 393 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 CNGB1Q14028 1251 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 CCER1Q8TC90 406 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 ZNF516Q92618 1163 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 ABCC12Q96J65 1359 aa7.45□□□□□ -1.22
RBBP4-219ENST00000531983 IBTKQ9P2D0 1353 aaPredicted RBP7.45□□□□□ -1.22
RBBP4-219ENST00000531983 NBPF26B4DH59 902 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 SNRPA1P09661 255 aaKnown RBP7.44□□□□□ -1.22
RBBP4-219ENST00000531983 ALDH1B1P30837 517 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 ECE1P42892 770 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 EIF6P56537 245 aaKnown RBP7.44□□□□□ -1.22
RBBP4-219ENST00000531983 GRM1Q13255 1194 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 DEFB115Q30KQ5 88 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 KIF6Q6ZMV9 814 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 RPGRQ92834 1020 aaKnown RBP7.44□□□□□ -1.22
RBBP4-219ENST00000531983 ZNF775Q96BV0 537 aaPredicted RBP7.44□□□□□ -1.22
RBBP4-219ENST00000531983 ABHD8Q96I13 439 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 NYXQ9GZU5 481 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 FAM198AQ9UFP1 575 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
RBBP4-219ENST00000531983 WDR33Q9C0J8 1336 aaKnown RBP7.44□□□□□ -1.22
RBBP4-219ENST00000531983 KDM3BQ7LBC6 1761 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 NEFMP07197 916 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 HSPA8P11142 646 aaKnown RBP7.43□□□□□ -1.22
RBBP4-219ENST00000531983 PDIA6Q15084 440 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 FAM161AQ3B820 660 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 CNTROBQ8N137 903 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 TATDN2Q93075 761 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 PSMD1Q99460 953 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 TMX4Q9H1E5 349 aaPredicted RBP7.43□□□□□ -1.22
RBBP4-219ENST00000531983 NUDCQ9Y266 331 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 SNED1Q8TER0 1413 aa7.43□□□□□ -1.22
RBBP4-219ENST00000531983 COL4A5P29400 1685 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 FZD9O00144 591 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
RBBP4-219ENST00000531983 KCNQ3O43525 872 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 RNF40O75150 1001 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 GGCXP38435 758 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 GRIPAP1Q4V328 841 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 CC2D2BQ6DHV5 1058 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 MCM10Q7L590 875 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 NIM1KQ8IY84 436 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 LARGE2Q8N3Y3 721 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 C7orf43Q8WVR3 580 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 CAPNS2Q96L46 248 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
RBBP4-219ENST00000531983 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
RBBP4-219ENST00000531983 PRAMEF22A3QJZ6 481 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 KLRG2A4D1S0 409 aaPredicted RBP7.41□□□□□ -1.22
RBBP4-219ENST00000531983 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 U2AF1L5P0DN76 240 aaPredicted RBP7.41□□□□□ -1.22
RBBP4-219ENST00000531983 U2AF1Q01081 240 aaKnown RBP eCLIP7.41□□□□□ -1.22
RBBP4-219ENST00000531983 CRY2Q49AN0 593 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 SYNE4Q8N205 404 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 CFAP44Q96MT7 982 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
RBBP4-219ENST00000531983 CCDC85CA6NKD9 419 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 PPIP5K2O43314 1243 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 CA12O43570 354 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 SCNN1DP51172 638 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.22
RBBP4-219ENST00000531983 CYP4F22Q6NT55 531 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 USP50Q70EL3 339 aaPredicted RBP7.4□□□□□ -1.22
RBBP4-219ENST00000531983 NUTM1Q86Y26 1132 aa7.4□□□□□ -1.22
RBBP4-219ENST00000531983 RBM17Q96I25 401 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms