RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 ITGA6P23229 1130 aa13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 EPHX2P34913 555 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 GPSM2P81274 684 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 EAPPQ56P03 285 aaPredicted RBP13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 NIM1KQ8IY84 436 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 JMYQ8N9B5 988 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
GPATCH4-216ENST00000531900 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 BCAR3O75815 825 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 ATF7IPQ6VMQ6 1270 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 ZNRF3Q9ULT6 936 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 XDHP47989 1333 aa13.63□□□□□ -0.23
GPATCH4-216ENST00000531900 TRIM27P14373 513 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 AOC3Q16853 763 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 EYA3Q99504 573 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
GPATCH4-216ENST00000531900 ATP2B4P23634 1241 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 ANKRD2Q9GZV1 360 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 LEMD3Q9Y2U8 911 aa13.61□□□□□ -0.23
GPATCH4-216ENST00000531900 CXCL9Q07325 125 aa13.6□□□□□ -0.23
GPATCH4-216ENST00000531900 CCDC57Q2TAC2 916 aa13.6□□□□□ -0.23
GPATCH4-216ENST00000531900 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
GPATCH4-216ENST00000531900 ZC3H12CQ9C0D7 883 aaKnown RBP13.6□□□□□ -0.23
GPATCH4-216ENST00000531900 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
GPATCH4-216ENST00000531900 A0A1B0GUL6 1792 aa13.59□□□□□ -0.23
GPATCH4-216ENST00000531900 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
GPATCH4-216ENST00000531900 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
GPATCH4-216ENST00000531900 PSME4Q14997 1843 aa13.59□□□□□ -0.23
GPATCH4-216ENST00000531900 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
GPATCH4-216ENST00000531900 SCN9AQ15858 1988 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 TMEM88BA6NKF7 163 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 UFL1O94874 794 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 CHRNDQ07001 517 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
GPATCH4-216ENST00000531900 ZNF609O15014 1411 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 SCNN1DP51172 638 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 TNIP1Q15025 636 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 IRS2Q9Y4H2 1338 aa13.57□□□□□ -0.24
GPATCH4-216ENST00000531900 GNAI3P08754 354 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 EPS15P42566 896 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 RFX5P48382 616 aaPredicted RBP13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 MTX1Q13505 466 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 DPF2Q92785 391 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 ZNF804BA4D1E1 1349 aa13.56□□□□□ -0.24
GPATCH4-216ENST00000531900 ADAMTSL1Q8N6G6 1762 aa13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 WTIPA6NIX2 430 aaPredicted RBP13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 ECE2O60344 883 aa13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 ZNF594Q96JF6 807 aaPredicted RBP13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 MEIS3Q99687 375 aa13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
GPATCH4-216ENST00000531900 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 COA1Q9GZY4 146 aa13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
GPATCH4-216ENST00000531900 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms