RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
NXF1-211ENST00000531709 CCDC144CPQ8IYA2 1237 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 TMC6Q7Z403 805 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 TAF5LO75529 589 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 HSP90AA4PQ58FG1 418 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 ATF3P18847 181 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 CCDC82Q8N4S0 544 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 NEURL1BA8MQ27 555 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 CTAGE5O15320 804 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
NXF1-211ENST00000531709 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
NXF1-211ENST00000531709 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
NXF1-211ENST00000531709 DLC1Q96QB1 1528 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
NXF1-211ENST00000531709 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
NXF1-211ENST00000531709 MARCKSP29966 332 aaPredicted RBP13.23□□□□□ -0.29
NXF1-211ENST00000531709 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 KDRP35968 1356 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
NXF1-211ENST00000531709 CYP21A2P08686 494 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
NXF1-211ENST00000531709 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
NXF1-211ENST00000531709 TMX1Q9H3N1 280 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 PAXBP1Q9Y5B6 917 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 ADCY9O60503 1353 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
NXF1-211ENST00000531709 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
NXF1-211ENST00000531709 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 STRN4Q9NRL3 753 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 RXRAP19793 462 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 EVA1CP58658 441 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 SCRN1Q12765 414 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
NXF1-211ENST00000531709 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
NXF1-211ENST00000531709 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
NXF1-211ENST00000531709 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
NXF1-211ENST00000531709 ERICH4A6NGS2 130 aa13.21□□□□□ -0.3
NXF1-211ENST00000531709 AP5Z1O43299 807 aa13.21□□□□□ -0.3
NXF1-211ENST00000531709 CACTINQ8WUQ7 758 aaKnown RBP13.21□□□□□ -0.3
NXF1-211ENST00000531709 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.3
NXF1-211ENST00000531709 ARID5BQ14865 1188 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 TTLL5Q6EMB2 1281 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 ZNF213O14771 459 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 CAVIN2O95810 425 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 ATP5JP18859 108 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 CLTCQ00610 1675 aaKnown RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
NXF1-211ENST00000531709 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
NXF1-211ENST00000531709 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
NXF1-211ENST00000531709 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
NXF1-211ENST00000531709 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
NXF1-211ENST00000531709 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
NXF1-211ENST00000531709 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
NXF1-211ENST00000531709 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
NXF1-211ENST00000531709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.19□□□□□ -0.3
NXF1-211ENST00000531709 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
NXF1-211ENST00000531709 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 MTX1Q13505 466 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 NEMFO60524 1076 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 URI1O94763 535 aaPredicted RBP13.18□□□□□ -0.3
NXF1-211ENST00000531709 GPTP24298 496 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 ELP1O95163 1332 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
NXF1-211ENST00000531709 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
NXF1-211ENST00000531709 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
NXF1-211ENST00000531709 SPTLC2O15270 562 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 PRC1O43663 620 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 E7EWF7 191 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms