RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 RNF43Q68DV7 783 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 KIAA1211Q6ZU35 1233 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 SHISA5Q8N114 240 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 SHKBP1Q8TBC3 707 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 UBASH3BQ8TF42 649 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 UTP4Q969X6 686 aaKnown RBP3.88□□□□□ -1.79
RC3H1-206ENST00000531594 FAM46AQ96IP4 442 aaKnown RBP3.88□□□□□ -1.79
RC3H1-206ENST00000531594 RTCBQ9Y3I0 505 aaKnown RBP3.88□□□□□ -1.79
RC3H1-206ENST00000531594 KCNMB2Q9Y691 235 aa3.88□□□□□ -1.79
RC3H1-206ENST00000531594 ADAM11O75078 769 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 XYLBO75191 536 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 WNT11O96014 354 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 C8AP07357 584 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 CRTC2Q53ET0 693 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-206ENST00000531594 RGL4Q8IZJ4 473 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 FOXD4L4Q8WXT5 416 aaPredicted RBP3.87□□□□□ -1.79
RC3H1-206ENST00000531594 DBNDD2Q9BQY9 259 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 LACRTQ9GZZ8 138 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 LRFN2Q9ULH4 789 aa3.87□□□□□ -1.79
RC3H1-206ENST00000531594 GHRHP01286 108 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 PREPP48147 710 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 SEC13P55735 322 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 TRIP4Q15650 581 aaPredicted RBP3.86□□□□□ -1.79
RC3H1-206ENST00000531594 FAM26DQ5JW98 314 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 HDGFL1Q5TGJ6 251 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 CMTR1Q8N1G2 835 aaKnown RBP3.86□□□□□ -1.79
RC3H1-206ENST00000531594 MYRFLQ96LU7 910 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 HINFPQ9BQA5 517 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 PPME1Q9Y570 386 aa3.86□□□□□ -1.79
RC3H1-206ENST00000531594 EGFRP00533 1210 aa3.85□□□□□ -1.79
RC3H1-206ENST00000531594 IGFBP4P22692 258 aa3.85□□□□□ -1.79
RC3H1-206ENST00000531594 CD68P34810 354 aaPredicted RBP3.85□□□□□ -1.79
RC3H1-206ENST00000531594 GRIK1P39086 918 aa3.85□□□□□ -1.79
RC3H1-206ENST00000531594 DPYDQ12882 1025 aa3.85□□□□□ -1.79
RC3H1-206ENST00000531594 INTS5Q6P9B9 1019 aaKnown RBP3.85□□□□□ -1.79
RC3H1-206ENST00000531594 FAM20CQ8IXL6 584 aa3.85□□□□□ -1.79
RC3H1-206ENST00000531594 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 WDR64B1ANS9 1081 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 PSAPP07602 524 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 BMP3P12645 472 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 HOXD8P13378 290 aaPredicted RBP3.84□□□□□ -1.79
RC3H1-206ENST00000531594 EPHA1P21709 976 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 BEND4Q6ZU67 534 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 CBLL1Q75N03 491 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 TREML1Q86YW5 311 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 BCANQ96GW7 911 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 MFSD14AQ96MC6 490 aa3.84□□□□□ -1.79
RC3H1-206ENST00000531594 SRA1Q9HD15 236 aaKnown RBP3.84□□□□□ -1.79
RC3H1-206ENST00000531594 SH2B1Q9NRF2 756 aaPredicted RBP3.84□□□□□ -1.79
RC3H1-206ENST00000531594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.84□□□□□ -1.79
RC3H1-206ENST00000531594 PTK7Q13308 1070 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 DUOXA2Q1HG44 320 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 MSMPQ1L6U9 139 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 UVSSAQ2YD98 709 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 C11orf91Q3C1V1 193 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 CEP135Q66GS9 1140 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.83□□□□□ -1.8
RC3H1-206ENST00000531594 MAP4K3Q8IVH8 894 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 ETFBKMTQ8IXQ9 262 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 KLHDC7BQ96G42 594 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 FAM83CQ9BQN1 747 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 CEP41Q9BYV8 373 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 RASSF4Q9H2L5 321 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 KCNF1Q9H3M0 494 aa3.83□□□□□ -1.8
RC3H1-206ENST00000531594 RBM19Q9Y4C8 960 aaKnown RBP3.83□□□□□ -1.8
RC3H1-206ENST00000531594 FSCN2O14926 492 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 F13BP05160 661 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 SOX18P35713 384 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 HGSNATQ68CP4 663 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 CLEC10AQ8IUN9 316 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 FBXL6Q8N531 539 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 MYO19Q96H55 970 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 C11orf16Q9NQ32 467 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 TFIP11Q9UBB9 837 aaKnown RBP3.82□□□□□ -1.8
RC3H1-206ENST00000531594 CCDC39Q9UFE4 941 aa3.82□□□□□ -1.8
RC3H1-206ENST00000531594 MAFBQ9Y5Q3 323 aaPredicted RBP3.82□□□□□ -1.8
RC3H1-206ENST00000531594 CYP2E1P05181 493 aaPredicted RBP3.81□□□□□ -1.8
RC3H1-206ENST00000531594 ACPPP15309 386 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 ARID4AP29374 1257 aaPredicted RBP3.81□□□□□ -1.8
RC3H1-206ENST00000531594 CDC27P30260 824 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 WEE1P30291 646 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 ZNF124Q15973 351 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 SGO2Q562F6 1265 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 COX20Q5RI15 118 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 ZNF648Q5T619 568 aaPredicted RBP3.81□□□□□ -1.8
RC3H1-206ENST00000531594 POU5F2Q8N7G0 328 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 ARXQ96QS3 562 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 SAP130Q9H0E3 1048 aa3.81□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L15C9J2P7 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L10C9JJH3 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L13C9JLJ4 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L12C9JPN9 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L11C9JVI0 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L21D6R901 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L18D6R9N7 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L22D6RA61 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L17D6RBQ6 530 aa3.8□□□□□ -1.8
RC3H1-206ENST00000531594 USP17L19D6RCP7 530 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms