RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 TAF1P21675 1872 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 COL4A1P02462 1669 aa17.11■□□□□ 0.33
AMBRA1-210ENST00000531542 ECE2O60344 883 aa17.11■□□□□ 0.33
AMBRA1-210ENST00000531542 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
AMBRA1-210ENST00000531542 DBNDD1Q9H9R9 158 aa17.11■□□□□ 0.33
AMBRA1-210ENST00000531542 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 CTSWP56202 376 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 CAPNS2Q96L46 248 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 ZNF609O15014 1411 aa17.1■□□□□ 0.33
AMBRA1-210ENST00000531542 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 H7C1W4 665 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 ANP32CO43423 234 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 MAP2K2P36507 400 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 XDHP47989 1333 aa17.09■□□□□ 0.33
AMBRA1-210ENST00000531542 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 UFL1O94874 794 aa17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 DOK7Q18PE1 504 aa17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
AMBRA1-210ENST00000531542 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 G2E3Q7L622 706 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 PODNQ7Z5L7 613 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 GPR101Q96P66 508 aaPredicted RBP17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
AMBRA1-210ENST00000531542 VAMP4O75379 141 aa17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 FLIIQ13045 1269 aa17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 GCKRQ14397 625 aa17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 CWF19L2Q2TBE0 894 aaKnown RBP17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 JARID2Q92833 1246 aaPredicted RBP17.06■□□□□ 0.32
AMBRA1-210ENST00000531542 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 MYH16Q9H6N6 1097 aa17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 MINPP1Q9UNW1 487 aa17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 TRPM7Q96QT4 1865 aa17.05■□□□□ 0.32
AMBRA1-210ENST00000531542 G3V3G9 751 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 EGFRP00533 1210 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 CSF1RP07333 972 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 CASP7P55210 303 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 GMLQ99445 158 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 GREM2Q9H772 168 aa17.04■□□□□ 0.32
AMBRA1-210ENST00000531542 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 CA12O43570 354 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 LBX1P52954 281 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
AMBRA1-210ENST00000531542 MMP14P50281 582 aa17.02■□□□□ 0.32
AMBRA1-210ENST00000531542 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
AMBRA1-210ENST00000531542 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
AMBRA1-210ENST00000531542 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
AMBRA1-210ENST00000531542 LEMD3Q9Y2U8 911 aa17.02■□□□□ 0.32
AMBRA1-210ENST00000531542 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
AMBRA1-210ENST00000531542 USP17L8P0C7I0 530 aa17■□□□□ 0.31
AMBRA1-210ENST00000531542 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
AMBRA1-210ENST00000531542 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
AMBRA1-210ENST00000531542 NOGQ13253 232 aa17■□□□□ 0.31
AMBRA1-210ENST00000531542 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
AMBRA1-210ENST00000531542 COA1Q9GZY4 146 aa17■□□□□ 0.31
AMBRA1-210ENST00000531542 PITPNM2Q9BZ72 1349 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 SCN9AQ15858 1988 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 ITGA6P23229 1130 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 STRIP1Q5VSL9 837 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 ZNF408Q9H9D4 720 aa16.99■□□□□ 0.31
AMBRA1-210ENST00000531542 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 AOC2O75106 756 aa16.98■□□□□ 0.31
AMBRA1-210ENST00000531542 HUNKP57058 714 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms