RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 EGFRP00533 1210 aa23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 GNAI1P63096 354 aa23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 TBC1D10BQ4KMP7 808 aaPredicted RBP23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 USP48Q86UV5 1035 aa23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 TBC1D16Q8TBP0 767 aa23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 JARID2Q92833 1246 aaPredicted RBP23.86■■□□□ 1.41
SSSCA1-206ENST00000531405 C8orf58Q8NAV2 365 aa23.85■■□□□ 1.41
SSSCA1-206ENST00000531405 DPF2Q92785 391 aa23.85■■□□□ 1.41
SSSCA1-206ENST00000531405 EYA3Q99504 573 aa23.85■■□□□ 1.41
SSSCA1-206ENST00000531405 MAP2K2P36507 400 aa23.84■■□□□ 1.41
SSSCA1-206ENST00000531405 ABHD8Q96I13 439 aa23.84■■□□□ 1.41
SSSCA1-206ENST00000531405 RBM26Q5T8P6 1007 aaKnown RBP23.83■■□□□ 1.41
SSSCA1-206ENST00000531405 CCDC85AQ96PX6 553 aaPredicted RBP23.83■■□□□ 1.41
SSSCA1-206ENST00000531405 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
SSSCA1-206ENST00000531405 HHIPL1Q96JK4 782 aa23.82■■□□□ 1.4
SSSCA1-206ENST00000531405 UFL1O94874 794 aa23.81■■□□□ 1.4
SSSCA1-206ENST00000531405 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
SSSCA1-206ENST00000531405 ANKIB1Q9P2G1 1089 aa23.81■■□□□ 1.4
SSSCA1-206ENST00000531405 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 RPS12P25398 132 aaKnown RBP23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 KRT26Q7Z3Y9 468 aa23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 CWC25Q9NXE8 425 aaPredicted RBP23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 PODXL2Q9NZ53 605 aa23.8■■□□□ 1.4
SSSCA1-206ENST00000531405 AKAP11Q9UKA4 1901 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 ADM5C9JUS6 153 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 PDE8AO60658 829 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 HUNKP57058 714 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 TSPYL6Q8N831 410 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 ZIC5Q96T25 663 aa23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 METTL22Q9BUU2 404 aaPredicted RBP23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 ZNF646O15015 1829 aaPredicted RBP23.79■■□□□ 1.4
SSSCA1-206ENST00000531405 HSP90B1P14625 803 aaKnown RBP23.78■■□□□ 1.4
SSSCA1-206ENST00000531405 BRPF1P55201 1214 aaPredicted RBP23.78■■□□□ 1.4
SSSCA1-206ENST00000531405 GGA1Q9UJY5 639 aa23.78■■□□□ 1.4
SSSCA1-206ENST00000531405 G3V3G9 751 aa23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 VIL1P09327 827 aaKnown RBP23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 KIF4BQ2VIQ3 1234 aa23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 DCAF8Q5TAQ9 597 aa23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 CCDC30Q5VVM6 783 aa23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 DCPSQ96C86 337 aaKnown RBP23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 MAP3K2Q9Y2U5 619 aa23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 ASTN2O75129 1339 aaPredicted RBP23.77■■□□□ 1.4
SSSCA1-206ENST00000531405 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
SSSCA1-206ENST00000531405 TSR2Q969E8 191 aaKnown RBP23.76■■□□□ 1.39
SSSCA1-206ENST00000531405 CA12O43570 354 aa23.74■■□□□ 1.39
SSSCA1-206ENST00000531405 ANKRD18AQ8IVF6 992 aa23.74■■□□□ 1.39
SSSCA1-206ENST00000531405 GBA2Q9HCG7 927 aaPredicted RBP23.74■■□□□ 1.39
SSSCA1-206ENST00000531405 GGA3Q9NZ52 723 aa23.74■■□□□ 1.39
SSSCA1-206ENST00000531405 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
SSSCA1-206ENST00000531405 IGKV5-2P06315 115 aa23.73■■□□□ 1.39
SSSCA1-206ENST00000531405 NOGQ13253 232 aa23.73■■□□□ 1.39
SSSCA1-206ENST00000531405 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
SSSCA1-206ENST00000531405 XDHP47989 1333 aa23.73■■□□□ 1.39
SSSCA1-206ENST00000531405 PI4KAP2A4QPH2 592 aa23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 WTIPA6NIX2 430 aaPredicted RBP23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 CTSWP56202 376 aa23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 RGMBQ6NW40 437 aa23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 KSR2Q6VAB6 950 aa23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 PI4KAP1Q8N8J0 262 aa23.72■■□□□ 1.39
SSSCA1-206ENST00000531405 ZNF609O15014 1411 aa23.71■■□□□ 1.39
SSSCA1-206ENST00000531405 CCDC85CA6NKD9 419 aa23.71■■□□□ 1.39
SSSCA1-206ENST00000531405 FAM155AB1AL88 458 aaPredicted RBP23.71■■□□□ 1.39
SSSCA1-206ENST00000531405 RSBN1LQ6PCB5 846 aaPredicted RBP23.71■■□□□ 1.39
SSSCA1-206ENST00000531405 C2orf69Q8N8R5 385 aa23.71■■□□□ 1.39
SSSCA1-206ENST00000531405 ZNF280AP59817 542 aaPredicted RBP23.7■■□□□ 1.38
SSSCA1-206ENST00000531405 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.38
SSSCA1-206ENST00000531405 SULF1Q8IWU6 871 aa23.7■■□□□ 1.38
SSSCA1-206ENST00000531405 ANGEL2Q5VTE6 544 aaKnown RBP23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 G2E3Q7L622 706 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 AGBL3Q8NEM8 1001 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 TTLL11Q8NHH1 800 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 CDCA5Q96FF9 252 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 CHMP4AQ9BY43 222 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 GREM2Q9H772 168 aa23.69■■□□□ 1.38
SSSCA1-206ENST00000531405 ATP2B4P23634 1241 aa23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 ZNF157P51786 506 aaPredicted RBP23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 SCARF1Q14162 830 aa23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 FAM161AQ3B820 660 aa23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 MCOLN1Q9GZU1 580 aa23.68■■□□□ 1.38
SSSCA1-206ENST00000531405 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
SSSCA1-206ENST00000531405 GMLQ99445 158 aa23.67■■□□□ 1.38
SSSCA1-206ENST00000531405 MINPP1Q9UNW1 487 aa23.67■■□□□ 1.38
SSSCA1-206ENST00000531405 TNRC18O15417 2968 aaPredicted RBP23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 A0A1B0GUL6 1792 aa23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 PAPPA2Q9BXP8 1791 aa23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 NEURL1BA8MQ27 555 aa23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 KIF23Q02241 960 aaPredicted RBP23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 MYOZ2Q9NPC6 264 aa23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 SCAF8Q9UPN6 1271 aaKnown RBP23.66■■□□□ 1.38
SSSCA1-206ENST00000531405 USP17L3A6NCW0 530 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 USP17L4A6NCW7 530 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 USP17L8P0C7I0 530 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 USP17L1Q7RTZ2 530 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 UBE3BQ7Z3V4 1068 aa23.65■■□□□ 1.38
SSSCA1-206ENST00000531405 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms