RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 DPF2Q92785 391 aa28.53■■■□□ 2.16
TRAPPC4-210ENST00000531290 GPR101Q96P66 508 aaPredicted RBP28.53■■■□□ 2.16
TRAPPC4-210ENST00000531290 FANCIQ9NVI1 1328 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 CTSWP56202 376 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 CWF19L2Q2TBE0 894 aaKnown RBP28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 MICALL2Q8IY33 904 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 TNS4Q8IZW8 715 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 AIDAQ96BJ3 306 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 PGAP2Q9UHJ9 254 aa28.52■■■□□ 2.16
TRAPPC4-210ENST00000531290 DUOX1Q9NRD9 1551 aa28.51■■■□□ 2.15
TRAPPC4-210ENST00000531290 NEURL1BA8MQ27 555 aa28.51■■■□□ 2.15
TRAPPC4-210ENST00000531290 HIRAP54198 1017 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC4-210ENST00000531290 CDC5LQ99459 802 aaKnown RBP28.51■■■□□ 2.15
TRAPPC4-210ENST00000531290 RPS12P25398 132 aaKnown RBP28.5■■■□□ 2.15
TRAPPC4-210ENST00000531290 FLIIQ13045 1269 aa28.5■■■□□ 2.15
TRAPPC4-210ENST00000531290 CST9Q5W186 159 aa28.5■■■□□ 2.15
TRAPPC4-210ENST00000531290 TRPM4Q8TD43 1214 aa28.5■■■□□ 2.15
TRAPPC4-210ENST00000531290 WDR33Q9C0J8 1336 aaKnown RBP28.49■■■□□ 2.15
TRAPPC4-210ENST00000531290 FKBP5Q13451 457 aaPredicted RBP28.49■■■□□ 2.15
TRAPPC4-210ENST00000531290 PAXIP1Q6ZW49 1069 aaPredicted RBP28.49■■■□□ 2.15
TRAPPC4-210ENST00000531290 TTLL11Q8NHH1 800 aa28.49■■■□□ 2.15
TRAPPC4-210ENST00000531290 KCNQ5Q9NR82 932 aa28.49■■■□□ 2.15
TRAPPC4-210ENST00000531290 SHTN1A0MZ66 631 aa28.48■■■□□ 2.15
TRAPPC4-210ENST00000531290 CDC37L1Q7L3B6 337 aa28.48■■■□□ 2.15
TRAPPC4-210ENST00000531290 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
TRAPPC4-210ENST00000531290 GLIS2Q9BZE0 524 aaPredicted RBP28.48■■■□□ 2.15
TRAPPC4-210ENST00000531290 XDHP47989 1333 aa28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 H7C1W4 665 aa28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 VAMP4O75379 141 aa28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 CELF2O95319 508 aaKnown RBP28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 EXOSC9Q06265 439 aaKnown RBP28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 UBE3BQ7Z3V4 1068 aa28.47■■■□□ 2.15
TRAPPC4-210ENST00000531290 TAF1P21675 1872 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 LRRC37AA6NMS7 1700 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 FOXN1O15353 648 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 ATP2B4P23634 1241 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 ECE1P42892 770 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 SAMD7Q7Z3H4 446 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 MYH16Q9H6N6 1097 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 GREM2Q9H772 168 aa28.46■■■□□ 2.15
TRAPPC4-210ENST00000531290 COL4A1P02462 1669 aa28.45■■■□□ 2.15
TRAPPC4-210ENST00000531290 GCKRQ14397 625 aa28.45■■■□□ 2.14
TRAPPC4-210ENST00000531290 TBC1D10BQ4KMP7 808 aaPredicted RBP28.45■■■□□ 2.14
TRAPPC4-210ENST00000531290 DNAAF4Q8WXU2 420 aa28.45■■■□□ 2.14
TRAPPC4-210ENST00000531290 WBP1LQ9NX94 342 aa28.45■■■□□ 2.14
TRAPPC4-210ENST00000531290 TLL2Q9Y6L7 1015 aa28.45■■■□□ 2.14
TRAPPC4-210ENST00000531290 VIL1P09327 827 aaKnown RBP28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 CTCFP49711 727 aaPredicted RBP28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 MAP2K1Q02750 393 aaPredicted RBP28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 RBM26Q5T8P6 1007 aaKnown RBP28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 CAPNS2Q96L46 248 aa28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 BSDC1Q9NW68 430 aaPredicted RBP28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 RTL9Q8NET4 1388 aa28.44■■■□□ 2.14
TRAPPC4-210ENST00000531290 GRM1Q13255 1194 aa28.43■■■□□ 2.14
TRAPPC4-210ENST00000531290 LINS1Q8NG48 757 aa28.43■■■□□ 2.14
TRAPPC4-210ENST00000531290 ZNF408Q9H9D4 720 aa28.43■■■□□ 2.14
TRAPPC4-210ENST00000531290 USP48Q86UV5 1035 aa28.42■■■□□ 2.14
TRAPPC4-210ENST00000531290 MINPP1Q9UNW1 487 aa28.42■■■□□ 2.14
TRAPPC4-210ENST00000531290 IGHMBP2P38935 993 aaKnown RBP28.41■■■□□ 2.14
TRAPPC4-210ENST00000531290 CYP4F22Q6NT55 531 aa28.41■■■□□ 2.14
TRAPPC4-210ENST00000531290 PLA2G12BQ9BX93 195 aa28.4■■■□□ 2.14
TRAPPC4-210ENST00000531290 PRDM10Q9NQV6 1147 aa28.4■■■□□ 2.14
TRAPPC4-210ENST00000531290 PODNQ7Z5L7 613 aa28.39■■■□□ 2.14
TRAPPC4-210ENST00000531290 SAPCD2Q86UD0 394 aa28.39■■■□□ 2.14
TRAPPC4-210ENST00000531290 DCPSQ96C86 337 aaKnown RBP28.39■■■□□ 2.14
TRAPPC4-210ENST00000531290 SPINK5Q9NQ38 1064 aaPredicted RBP28.39■■■□□ 2.14
TRAPPC4-210ENST00000531290 EGFRP00533 1210 aa28.38■■■□□ 2.13
TRAPPC4-210ENST00000531290 RSBN1LQ6PCB5 846 aaPredicted RBP28.38■■■□□ 2.13
TRAPPC4-210ENST00000531290 KRT26Q7Z3Y9 468 aa28.38■■■□□ 2.13
TRAPPC4-210ENST00000531290 CAPN15O75808 1086 aa28.37■■■□□ 2.13
TRAPPC4-210ENST00000531290 ITGA6P23229 1130 aa28.37■■■□□ 2.13
TRAPPC4-210ENST00000531290 KIF4BQ2VIQ3 1234 aa28.37■■■□□ 2.13
TRAPPC4-210ENST00000531290 AGBL3Q8NEM8 1001 aa28.37■■■□□ 2.13
TRAPPC4-210ENST00000531290 BEGAINQ9BUH8 593 aa28.37■■■□□ 2.13
TRAPPC4-210ENST00000531290 CCT4P50991 539 aaKnown RBP28.36■■■□□ 2.13
TRAPPC4-210ENST00000531290 CASP7P55210 303 aa28.36■■■□□ 2.13
TRAPPC4-210ENST00000531290 MPHOSPH8Q99549 860 aa28.36■■■□□ 2.13
TRAPPC4-210ENST00000531290 USP17L3A6NCW0 530 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 USP17L4A6NCW7 530 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 CSF1RP07333 972 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 USP17L1Q7RTZ2 530 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 HHIPL1Q96JK4 782 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 LEMD3Q9Y2U8 911 aa28.35■■■□□ 2.13
TRAPPC4-210ENST00000531290 WTIPA6NIX2 430 aaPredicted RBP28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 F6X3S4 739 aa28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 MAP2K2P36507 400 aa28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 LBX1P52954 281 aa28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 ANKRD2Q9GZV1 360 aa28.34■■■□□ 2.13
TRAPPC4-210ENST00000531290 ZNF280AP59817 542 aaPredicted RBP28.33■■■□□ 2.13
TRAPPC4-210ENST00000531290 MED23Q9ULK4 1368 aa28.33■■■□□ 2.13
TRAPPC4-210ENST00000531290 USP17L8P0C7I0 530 aa28.32■■■□□ 2.12
TRAPPC4-210ENST00000531290 BEND3Q5T5X7 828 aa28.32■■■□□ 2.12
TRAPPC4-210ENST00000531290 DLK2Q6UY11 383 aa28.32■■■□□ 2.12
TRAPPC4-210ENST00000531290 SULF1Q8IWU6 871 aa28.32■■■□□ 2.12
TRAPPC4-210ENST00000531290 ANKRD18BA2A2Z9 1011 aa28.31■■■□□ 2.12
TRAPPC4-210ENST00000531290 AOC2O75106 756 aa28.31■■■□□ 2.12
TRAPPC4-210ENST00000531290 ADM5C9JUS6 153 aa28.3■■■□□ 2.12
TRAPPC4-210ENST00000531290 HSPA8P11142 646 aaKnown RBP28.3■■■□□ 2.12
TRAPPC4-210ENST00000531290 C2orf69Q8N8R5 385 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms