RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 DOK7Q18PE1 504 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 G2E3Q7L622 706 aa20.27■□□□□ 0.84
CPSF1-205ENST00000531042 WDR33Q9C0J8 1336 aaKnown RBP20.27■□□□□ 0.83
CPSF1-205ENST00000531042 H7C1D1 291 aa20.26■□□□□ 0.83
CPSF1-205ENST00000531042 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
CPSF1-205ENST00000531042 TRPM4Q8TD43 1214 aa20.26■□□□□ 0.83
CPSF1-205ENST00000531042 ZC3H12CQ9C0D7 883 aaKnown RBP20.26■□□□□ 0.83
CPSF1-205ENST00000531042 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
CPSF1-205ENST00000531042 ANKIB1Q9P2G1 1089 aa20.26■□□□□ 0.83
CPSF1-205ENST00000531042 UFL1O94874 794 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 ANKRD18AQ8IVF6 992 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 GLIS2Q9BZE0 524 aaPredicted RBP20.25■□□□□ 0.83
CPSF1-205ENST00000531042 WBP1LQ9NX94 342 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 MYH3P11055 1940 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
CPSF1-205ENST00000531042 RTL9Q8NET4 1388 aa20.24■□□□□ 0.83
CPSF1-205ENST00000531042 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
CPSF1-205ENST00000531042 CTSWP56202 376 aa20.24■□□□□ 0.83
CPSF1-205ENST00000531042 CWF19L2Q2TBE0 894 aaKnown RBP20.24■□□□□ 0.83
CPSF1-205ENST00000531042 AIDAQ96BJ3 306 aa20.24■□□□□ 0.83
CPSF1-205ENST00000531042 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
CPSF1-205ENST00000531042 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
CPSF1-205ENST00000531042 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 SAMD7Q7Z3H4 446 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 TTLL11Q8NHH1 800 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
CPSF1-205ENST00000531042 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
CPSF1-205ENST00000531042 H7C1W4 665 aa20.22■□□□□ 0.83
CPSF1-205ENST00000531042 CELF2O95319 508 aaKnown RBP20.22■□□□□ 0.83
CPSF1-205ENST00000531042 CAPNS2Q96L46 248 aa20.22■□□□□ 0.83
CPSF1-205ENST00000531042 CDC5LQ99459 802 aaKnown RBP20.22■□□□□ 0.83
CPSF1-205ENST00000531042 XDHP47989 1333 aa20.22■□□□□ 0.83
CPSF1-205ENST00000531042 THSD7BQ9C0I4 1608 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 G3V3G9 751 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 VIL1P09327 827 aaKnown RBP20.21■□□□□ 0.83
CPSF1-205ENST00000531042 ECE1P42892 770 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 CTCFP49711 727 aaPredicted RBP20.21■□□□□ 0.83
CPSF1-205ENST00000531042 FLIIQ13045 1269 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 DCAF8Q5TAQ9 597 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 CYP4F22Q6NT55 531 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 PRDM10Q9NQV6 1147 aa20.21■□□□□ 0.83
CPSF1-205ENST00000531042 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 VAMP4O75379 141 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 EGFRP00533 1210 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 MAP2K1Q02750 393 aaPredicted RBP20.2■□□□□ 0.82
CPSF1-205ENST00000531042 TBC1D10BQ4KMP7 808 aaPredicted RBP20.2■□□□□ 0.82
CPSF1-205ENST00000531042 PAXIP1Q6ZW49 1069 aaPredicted RBP20.2■□□□□ 0.82
CPSF1-205ENST00000531042 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 SAPCD2Q86UD0 394 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 GREM2Q9H772 168 aa20.2■□□□□ 0.82
CPSF1-205ENST00000531042 PSME4Q14997 1843 aa20.19■□□□□ 0.82
CPSF1-205ENST00000531042 ATP2B4P23634 1241 aa20.19■□□□□ 0.82
CPSF1-205ENST00000531042 EXOSC9Q06265 439 aaKnown RBP20.19■□□□□ 0.82
CPSF1-205ENST00000531042 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
CPSF1-205ENST00000531042 GCKRQ14397 625 aa20.19■□□□□ 0.82
CPSF1-205ENST00000531042 BSDC1Q9NW68 430 aaPredicted RBP20.19■□□□□ 0.82
CPSF1-205ENST00000531042 GRM1Q13255 1194 aa20.18■□□□□ 0.82
CPSF1-205ENST00000531042 USP48Q86UV5 1035 aa20.18■□□□□ 0.82
CPSF1-205ENST00000531042 DNAAF4Q8WXU2 420 aa20.18■□□□□ 0.82
CPSF1-205ENST00000531042 ZNF408Q9H9D4 720 aa20.18■□□□□ 0.82
CPSF1-205ENST00000531042 MINPP1Q9UNW1 487 aa20.18■□□□□ 0.82
CPSF1-205ENST00000531042 POLR2AP24928 1970 aaKnown RBP20.17■□□□□ 0.82
CPSF1-205ENST00000531042 CAPN15O75808 1086 aa20.17■□□□□ 0.82
CPSF1-205ENST00000531042 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
CPSF1-205ENST00000531042 HHIPL1Q96JK4 782 aa20.17■□□□□ 0.82
CPSF1-205ENST00000531042 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
CPSF1-205ENST00000531042 ZNF609O15014 1411 aa20.17■□□□□ 0.82
CPSF1-205ENST00000531042 WTIPA6NIX2 430 aaPredicted RBP20.16■□□□□ 0.82
CPSF1-205ENST00000531042 LBX1P52954 281 aa20.16■□□□□ 0.82
CPSF1-205ENST00000531042 CASP7P55210 303 aa20.16■□□□□ 0.82
CPSF1-205ENST00000531042 LINS1Q8NG48 757 aa20.16■□□□□ 0.82
CPSF1-205ENST00000531042 MYH16Q9H6N6 1097 aa20.16■□□□□ 0.82
CPSF1-205ENST00000531042 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
CPSF1-205ENST00000531042 HSPA8P11142 646 aaKnown RBP20.15■□□□□ 0.82
CPSF1-205ENST00000531042 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 RSBN1LQ6PCB5 846 aaPredicted RBP20.15■□□□□ 0.82
CPSF1-205ENST00000531042 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 PODNQ7Z5L7 613 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 AGBL3Q8NEM8 1001 aa20.15■□□□□ 0.82
CPSF1-205ENST00000531042 DCPSQ96C86 337 aaKnown RBP20.15■□□□□ 0.82
CPSF1-205ENST00000531042 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
CPSF1-205ENST00000531042 AOC2O75106 756 aa20.14■□□□□ 0.81
CPSF1-205ENST00000531042 CSF1RP07333 972 aa20.14■□□□□ 0.81
CPSF1-205ENST00000531042 MAP2K2P36507 400 aa20.14■□□□□ 0.81
CPSF1-205ENST00000531042 IGHMBP2P38935 993 aaKnown RBP20.14■□□□□ 0.81
CPSF1-205ENST00000531042 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
CPSF1-205ENST00000531042 USP17L3A6NCW0 530 aa20.13■□□□□ 0.81
CPSF1-205ENST00000531042 USP17L4A6NCW7 530 aa20.13■□□□□ 0.81
CPSF1-205ENST00000531042 ITGA6P23229 1130 aa20.13■□□□□ 0.81
CPSF1-205ENST00000531042 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
CPSF1-205ENST00000531042 USP17L1Q7RTZ2 530 aa20.13■□□□□ 0.81
CPSF1-205ENST00000531042 GMLQ99445 158 aa20.13■□□□□ 0.81
CPSF1-205ENST00000531042 ADM5C9JUS6 153 aa20.12■□□□□ 0.81
CPSF1-205ENST00000531042 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms