RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR13H1Q8NG92 308 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 LPIN3Q9BQK8 851 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 TMEM63CQ9P1W3 806 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 LOC102724428A0A0B4J2F2 783 aa12.82□□□□□ -0.36
CSDE1-213ENST00000530784 RGS9O75916 674 aaPredicted RBP12.82□□□□□ -0.36
CSDE1-213ENST00000530784 BRD1O95696 1058 aa12.82□□□□□ -0.36
CSDE1-213ENST00000530784 HOXD8P13378 290 aaPredicted RBP12.82□□□□□ -0.36
CSDE1-213ENST00000530784 SIK1P57059 783 aa12.82□□□□□ -0.36
CSDE1-213ENST00000530784 ZNF438Q7Z4V0 828 aa12.82□□□□□ -0.36
CSDE1-213ENST00000530784 GLYCTKQ8IVS8 523 aa12.82□□□□□ -0.36
CSDE1-213ENST00000530784 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
CSDE1-213ENST00000530784 ABI2Q9NYB9 513 aaPredicted RBP12.82□□□□□ -0.36
CSDE1-213ENST00000530784 NID1P14543 1247 aa12.81□□□□□ -0.36
CSDE1-213ENST00000530784 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
CSDE1-213ENST00000530784 NOP53Q9NZM5 478 aaKnown RBP12.81□□□□□ -0.36
CSDE1-213ENST00000530784 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
CSDE1-213ENST00000530784 AFF1P51825 1210 aaKnown RBP12.8□□□□□ -0.36
CSDE1-213ENST00000530784 XKR5Q6UX68 686 aa12.8□□□□□ -0.36
CSDE1-213ENST00000530784 TTC16Q8NEE8 873 aa12.8□□□□□ -0.36
CSDE1-213ENST00000530784 FRRS1LQ9P0K9 344 aa12.8□□□□□ -0.36
CSDE1-213ENST00000530784 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
CSDE1-213ENST00000530784 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
CSDE1-213ENST00000530784 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
CSDE1-213ENST00000530784 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
CSDE1-213ENST00000530784 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
CSDE1-213ENST00000530784 ARHGAP4P98171 946 aa12.77□□□□□ -0.37
CSDE1-213ENST00000530784 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 GHRHP01286 108 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 USP5P45974 858 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 HYAL2Q12891 473 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 GRIK5Q16478 980 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
CSDE1-213ENST00000530784 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
CSDE1-213ENST00000530784 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
CSDE1-213ENST00000530784 GJD3Q8N144 294 aa12.75□□□□□ -0.37
CSDE1-213ENST00000530784 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
CSDE1-213ENST00000530784 TTC9Q92623 222 aa12.75□□□□□ -0.37
CSDE1-213ENST00000530784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
CSDE1-213ENST00000530784 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
CSDE1-213ENST00000530784 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
CSDE1-213ENST00000530784 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
CSDE1-213ENST00000530784 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
CSDE1-213ENST00000530784 RBSNQ9H1K0 784 aa12.73□□□□□ -0.37
CSDE1-213ENST00000530784 KANSL3Q9P2N6 904 aa12.73□□□□□ -0.37
CSDE1-213ENST00000530784 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
CSDE1-213ENST00000530784 SOWAHDA6NJG2 315 aa12.72□□□□□ -0.37
CSDE1-213ENST00000530784 EHHADHQ08426 723 aa12.72□□□□□ -0.37
CSDE1-213ENST00000530784 TNFRSF21O75509 655 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 KIF4AO95239 1232 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 ITGB2P05107 769 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 CES1P23141 567 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 DMRTC2Q8IXT2 367 aaPredicted RBP12.71□□□□□ -0.37
CSDE1-213ENST00000530784 SPACA7Q96KW9 195 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 CHRDQ9H2X0 955 aa12.71□□□□□ -0.37
CSDE1-213ENST00000530784 ATP11AP98196 1134 aa12.7□□□□□ -0.38
CSDE1-213ENST00000530784 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
CSDE1-213ENST00000530784 PRRT3Q5FWE3 981 aa12.7□□□□□ -0.38
CSDE1-213ENST00000530784 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
CSDE1-213ENST00000530784 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
CSDE1-213ENST00000530784 NCAPG2Q86XI2 1143 aa12.7□□□□□ -0.38
CSDE1-213ENST00000530784 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
CSDE1-213ENST00000530784 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
CSDE1-213ENST00000530784 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
CSDE1-213ENST00000530784 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 NDUFB5O43674 189 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
CSDE1-213ENST00000530784 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 CEP120Q8N960 986 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 TRIM33Q9UPN9 1127 aa12.68□□□□□ -0.38
CSDE1-213ENST00000530784 PHACTR2O75167 634 aa12.67□□□□□ -0.38
CSDE1-213ENST00000530784 WFDC8Q8IUA0 241 aa12.67□□□□□ -0.38
CSDE1-213ENST00000530784 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
CSDE1-213ENST00000530784 IVNS1ABPQ9Y6Y0 642 aa12.67□□□□□ -0.38
CSDE1-213ENST00000530784 EREGO14944 169 aa12.66□□□□□ -0.38
CSDE1-213ENST00000530784 KCNA1Q09470 495 aa12.66□□□□□ -0.38
CSDE1-213ENST00000530784 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
CSDE1-213ENST00000530784 PMEPA1Q969W9 287 aa12.66□□□□□ -0.38
CSDE1-213ENST00000530784 ACPPP15309 386 aa12.65□□□□□ -0.38
CSDE1-213ENST00000530784 BAG6P46379 1132 aa12.65□□□□□ -0.38
CSDE1-213ENST00000530784 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
CSDE1-213ENST00000530784 C1QTNF9BB2RNN3 333 aa12.64□□□□□ -0.39
CSDE1-213ENST00000530784 RAC1P63000 192 aa12.64□□□□□ -0.39
CSDE1-213ENST00000530784 GRIK4Q16099 956 aa12.64□□□□□ -0.39
CSDE1-213ENST00000530784 CD163Q86VB7 1156 aa12.64□□□□□ -0.39
CSDE1-213ENST00000530784 PBX4Q9BYU1 374 aa12.64□□□□□ -0.39
CSDE1-213ENST00000530784 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
CSDE1-213ENST00000530784 CHRNA4P43681 627 aa12.63□□□□□ -0.39
CSDE1-213ENST00000530784 IL22RA1Q8N6P7 574 aa12.63□□□□□ -0.39
CSDE1-213ENST00000530784 ADAMTSL4Q6UY14 1074 aa12.62□□□□□ -0.39
CSDE1-213ENST00000530784 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
CSDE1-213ENST00000530784 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
CSDE1-213ENST00000530784 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
CSDE1-213ENST00000530784 TRPA1O75762 1119 aa12.61□□□□□ -0.39
CSDE1-213ENST00000530784 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
CSDE1-213ENST00000530784 CITED4Q96RK1 184 aa12.61□□□□□ -0.39
CSDE1-213ENST00000530784 LACRTQ9GZZ8 138 aa12.61□□□□□ -0.39
CSDE1-213ENST00000530784 APBA3O96018 575 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms