RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 SHTN1A0MZ66 631 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 DOK7Q18PE1 504 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 CST9Q5W186 159 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 MICALL2Q8IY33 904 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 TRPM4Q8TD43 1214 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 AIDAQ96BJ3 306 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 PGAP2Q9UHJ9 254 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 PSME4Q14997 1843 aa21.82■■□□□ 1.08
PKP3-207ENST00000530695 WDR33Q9C0J8 1336 aaKnown RBP21.81■■□□□ 1.08
PKP3-207ENST00000530695 FOXN1O15353 648 aa21.81■■□□□ 1.08
PKP3-207ENST00000530695 UFL1O94874 794 aa21.81■■□□□ 1.08
PKP3-207ENST00000530695 SLC4A2P04920 1241 aa21.81■■□□□ 1.08
PKP3-207ENST00000530695 HIRAP54198 1017 aaPredicted RBP21.81■■□□□ 1.08
PKP3-207ENST00000530695 G2E3Q7L622 706 aa21.81■■□□□ 1.08
PKP3-207ENST00000530695 ZC3H15Q8WU90 426 aaKnown RBP21.81■■□□□ 1.08
PKP3-207ENST00000530695 DPF2Q92785 391 aa21.81■■□□□ 1.08
PKP3-207ENST00000530695 ZC3H12CQ9C0D7 883 aaKnown RBP21.81■■□□□ 1.08
PKP3-207ENST00000530695 CWF19L2Q2TBE0 894 aaKnown RBP21.8■■□□□ 1.08
PKP3-207ENST00000530695 ANKRD18AQ8IVF6 992 aa21.8■■□□□ 1.08
PKP3-207ENST00000530695 GLIS2Q9BZE0 524 aaPredicted RBP21.8■■□□□ 1.08
PKP3-207ENST00000530695 KCNQ5Q9NR82 932 aa21.8■■□□□ 1.08
PKP3-207ENST00000530695 GGA1Q9UJY5 639 aa21.8■■□□□ 1.08
PKP3-207ENST00000530695 SALL2Q9Y467 1007 aaPredicted RBP21.8■■□□□ 1.08
PKP3-207ENST00000530695 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
PKP3-207ENST00000530695 RTL9Q8NET4 1388 aa21.79■■□□□ 1.08
PKP3-207ENST00000530695 NEURL1BA8MQ27 555 aa21.79■■□□□ 1.08
PKP3-207ENST00000530695 CTSWP56202 376 aa21.79■■□□□ 1.08
PKP3-207ENST00000530695 PAXIP1Q6ZW49 1069 aaPredicted RBP21.79■■□□□ 1.08
PKP3-207ENST00000530695 THSD7BQ9C0I4 1608 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 G3V3G9 751 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 CELF2O95319 508 aaKnown RBP21.78■■□□□ 1.08
PKP3-207ENST00000530695 RPS12P25398 132 aaKnown RBP21.78■■□□□ 1.08
PKP3-207ENST00000530695 DCAF8Q5TAQ9 597 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 SAMD7Q7Z3H4 446 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 WBP1LQ9NX94 342 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 TLL2Q9Y6L7 1015 aa21.78■■□□□ 1.08
PKP3-207ENST00000530695 CTCFP49711 727 aaPredicted RBP21.77■■□□□ 1.08
PKP3-207ENST00000530695 FLIIQ13045 1269 aa21.77■■□□□ 1.08
PKP3-207ENST00000530695 CDC37L1Q7L3B6 337 aa21.77■■□□□ 1.08
PKP3-207ENST00000530695 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
PKP3-207ENST00000530695 TTLL11Q8NHH1 800 aa21.77■■□□□ 1.08
PKP3-207ENST00000530695 CAPNS2Q96L46 248 aa21.77■■□□□ 1.08
PKP3-207ENST00000530695 CDC5LQ99459 802 aaKnown RBP21.77■■□□□ 1.08
PKP3-207ENST00000530695 XDHP47989 1333 aa21.77■■□□□ 1.07
PKP3-207ENST00000530695 CAPN15O75808 1086 aa21.76■■□□□ 1.07
PKP3-207ENST00000530695 ECE1P42892 770 aa21.76■■□□□ 1.07
PKP3-207ENST00000530695 TBC1D10BQ4KMP7 808 aaPredicted RBP21.76■■□□□ 1.07
PKP3-207ENST00000530695 UBE3BQ7Z3V4 1068 aa21.76■■□□□ 1.07
PKP3-207ENST00000530695 GREM2Q9H772 168 aa21.76■■□□□ 1.07
PKP3-207ENST00000530695 MAP2K1Q02750 393 aaPredicted RBP21.75■■□□□ 1.07
PKP3-207ENST00000530695 GRM1Q13255 1194 aa21.75■■□□□ 1.07
PKP3-207ENST00000530695 FKBP5Q13451 457 aaPredicted RBP21.75■■□□□ 1.07
PKP3-207ENST00000530695 CYP4F22Q6NT55 531 aa21.75■■□□□ 1.07
PKP3-207ENST00000530695 ZNF408Q9H9D4 720 aa21.75■■□□□ 1.07
PKP3-207ENST00000530695 H7C1W4 665 aa21.74■■□□□ 1.07
PKP3-207ENST00000530695 VAMP4O75379 141 aa21.74■■□□□ 1.07
PKP3-207ENST00000530695 EGFRP00533 1210 aa21.74■■□□□ 1.07
PKP3-207ENST00000530695 VIL1P09327 827 aaKnown RBP21.74■■□□□ 1.07
PKP3-207ENST00000530695 PRDM10Q9NQV6 1147 aa21.74■■□□□ 1.07
PKP3-207ENST00000530695 ATP2B4P23634 1241 aa21.73■■□□□ 1.07
PKP3-207ENST00000530695 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
PKP3-207ENST00000530695 GCKRQ14397 625 aa21.73■■□□□ 1.07
PKP3-207ENST00000530695 RBM26Q5T8P6 1007 aaKnown RBP21.73■■□□□ 1.07
PKP3-207ENST00000530695 SAPCD2Q86UD0 394 aa21.73■■□□□ 1.07
PKP3-207ENST00000530695 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
PKP3-207ENST00000530695 DNAAF4Q8WXU2 420 aa21.73■■□□□ 1.07
PKP3-207ENST00000530695 BSDC1Q9NW68 430 aaPredicted RBP21.73■■□□□ 1.07
PKP3-207ENST00000530695 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
PKP3-207ENST00000530695 LBX1P52954 281 aa21.71■■□□□ 1.07
PKP3-207ENST00000530695 FAM9BQ8IZU0 186 aa21.71■■□□□ 1.07
PKP3-207ENST00000530695 MINPP1Q9UNW1 487 aa21.71■■□□□ 1.07
PKP3-207ENST00000530695 KIF4BQ2VIQ3 1234 aa21.7■■□□□ 1.06
PKP3-207ENST00000530695 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
PKP3-207ENST00000530695 LINS1Q8NG48 757 aa21.7■■□□□ 1.06
PKP3-207ENST00000530695 DCPSQ96C86 337 aaKnown RBP21.7■■□□□ 1.06
PKP3-207ENST00000530695 HHIPL1Q96JK4 782 aa21.7■■□□□ 1.06
PKP3-207ENST00000530695 PLA2G12BQ9BX93 195 aa21.7■■□□□ 1.06
PKP3-207ENST00000530695 WTIPA6NIX2 430 aaPredicted RBP21.69■■□□□ 1.06
PKP3-207ENST00000530695 CASP7P55210 303 aa21.69■■□□□ 1.06
PKP3-207ENST00000530695 RSBN1LQ6PCB5 846 aaPredicted RBP21.69■■□□□ 1.06
PKP3-207ENST00000530695 DLK2Q6UY11 383 aa21.69■■□□□ 1.06
PKP3-207ENST00000530695 AGBL3Q8NEM8 1001 aa21.69■■□□□ 1.06
PKP3-207ENST00000530695 BEGAINQ9BUH8 593 aa21.69■■□□□ 1.06
PKP3-207ENST00000530695 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
PKP3-207ENST00000530695 ZNF609O15014 1411 aa21.69■■□□□ 1.06
PKP3-207ENST00000530695 ZNF646O15015 1829 aaPredicted RBP21.69■■□□□ 1.06
PKP3-207ENST00000530695 AOC2O75106 756 aa21.68■■□□□ 1.06
PKP3-207ENST00000530695 HSPA8P11142 646 aaKnown RBP21.68■■□□□ 1.06
PKP3-207ENST00000530695 MAP2K2P36507 400 aa21.68■■□□□ 1.06
PKP3-207ENST00000530695 IGHMBP2P38935 993 aaKnown RBP21.68■■□□□ 1.06
PKP3-207ENST00000530695 PODNQ7Z5L7 613 aa21.68■■□□□ 1.06
PKP3-207ENST00000530695 MED23Q9ULK4 1368 aa21.68■■□□□ 1.06
PKP3-207ENST00000530695 USP17L3A6NCW0 530 aa21.67■■□□□ 1.06
PKP3-207ENST00000530695 USP17L4A6NCW7 530 aa21.67■■□□□ 1.06
PKP3-207ENST00000530695 ITGA6P23229 1130 aa21.67■■□□□ 1.06
PKP3-207ENST00000530695 CCT4P50991 539 aaKnown RBP21.67■■□□□ 1.06
PKP3-207ENST00000530695 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
PKP3-207ENST00000530695 USP17L1Q7RTZ2 530 aa21.67■■□□□ 1.06
PKP3-207ENST00000530695 ADM5C9JUS6 153 aa21.66■■□□□ 1.06
PKP3-207ENST00000530695 ZNF280AP59817 542 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms