RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 FMR1Q06787 632 aaKnown RBP eCLIP26.78■■□□□ 1.88
SMPD1-204ENST00000530395 DOK7Q18PE1 504 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 ANKRD18AQ8IVF6 992 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 MICALL2Q8IY33 904 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 GGA1Q9UJY5 639 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 FANCIQ9NVI1 1328 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 SPEF2Q9C093 1822 aa26.78■■□□□ 1.88
SMPD1-204ENST00000530395 WDR33Q9C0J8 1336 aaKnown RBP26.77■■□□□ 1.88
SMPD1-204ENST00000530395 G3V3G9 751 aa26.77■■□□□ 1.88
SMPD1-204ENST00000530395 RPS12P25398 132 aaKnown RBP26.77■■□□□ 1.88
SMPD1-204ENST00000530395 CTSWP56202 376 aa26.77■■□□□ 1.88
SMPD1-204ENST00000530395 DCAF8Q5TAQ9 597 aa26.77■■□□□ 1.88
SMPD1-204ENST00000530395 GPR101Q96P66 508 aaPredicted RBP26.77■■□□□ 1.88
SMPD1-204ENST00000530395 CDC5LQ99459 802 aaKnown RBP26.77■■□□□ 1.88
SMPD1-204ENST00000530395 PGAP2Q9UHJ9 254 aa26.77■■□□□ 1.88
SMPD1-204ENST00000530395 ZBTB12Q9Y330 459 aaPredicted RBP26.77■■□□□ 1.88
SMPD1-204ENST00000530395 PAXIP1Q6ZW49 1069 aaPredicted RBP26.76■■□□□ 1.87
SMPD1-204ENST00000530395 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
SMPD1-204ENST00000530395 TRPM4Q8TD43 1214 aa26.76■■□□□ 1.87
SMPD1-204ENST00000530395 SCN9AQ15858 1988 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 XDHP47989 1333 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 NEURL1BA8MQ27 555 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 FOXN1O15353 648 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 ECE1P42892 770 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 CWF19L2Q2TBE0 894 aaKnown RBP26.75■■□□□ 1.87
SMPD1-204ENST00000530395 G2E3Q7L622 706 aa26.75■■□□□ 1.87
SMPD1-204ENST00000530395 GLIS2Q9BZE0 524 aaPredicted RBP26.75■■□□□ 1.87
SMPD1-204ENST00000530395 SALL2Q9Y467 1007 aaPredicted RBP26.75■■□□□ 1.87
SMPD1-204ENST00000530395 HIRAP54198 1017 aaPredicted RBP26.74■■□□□ 1.87
SMPD1-204ENST00000530395 FLIIQ13045 1269 aa26.74■■□□□ 1.87
SMPD1-204ENST00000530395 CST9Q5W186 159 aa26.74■■□□□ 1.87
SMPD1-204ENST00000530395 THSD7BQ9C0I4 1608 aa26.74■■□□□ 1.87
SMPD1-204ENST00000530395 PSME4Q14997 1843 aa26.74■■□□□ 1.87
SMPD1-204ENST00000530395 RTL9Q8NET4 1388 aa26.73■■□□□ 1.87
SMPD1-204ENST00000530395 SHTN1A0MZ66 631 aa26.73■■□□□ 1.87
SMPD1-204ENST00000530395 CTCFP49711 727 aaPredicted RBP26.73■■□□□ 1.87
SMPD1-204ENST00000530395 CDC37L1Q7L3B6 337 aa26.73■■□□□ 1.87
SMPD1-204ENST00000530395 TLL2Q9Y6L7 1015 aa26.73■■□□□ 1.87
SMPD1-204ENST00000530395 CELF2O95319 508 aaKnown RBP26.72■■□□□ 1.87
SMPD1-204ENST00000530395 MAP2K1Q02750 393 aaPredicted RBP26.72■■□□□ 1.87
SMPD1-204ENST00000530395 FKBP5Q13451 457 aaPredicted RBP26.72■■□□□ 1.87
SMPD1-204ENST00000530395 TTLL11Q8NHH1 800 aa26.72■■□□□ 1.87
SMPD1-204ENST00000530395 CAPNS2Q96L46 248 aa26.72■■□□□ 1.87
SMPD1-204ENST00000530395 WBP1LQ9NX94 342 aa26.72■■□□□ 1.87
SMPD1-204ENST00000530395 ATP2B4P23634 1241 aa26.71■■□□□ 1.87
SMPD1-204ENST00000530395 UBE3BQ7Z3V4 1068 aa26.71■■□□□ 1.87
SMPD1-204ENST00000530395 MYH16Q9H6N6 1097 aa26.71■■□□□ 1.87
SMPD1-204ENST00000530395 KCNQ5Q9NR82 932 aa26.71■■□□□ 1.87
SMPD1-204ENST00000530395 TBC1D10BQ4KMP7 808 aaPredicted RBP26.7■■□□□ 1.86
SMPD1-204ENST00000530395 SAMD7Q7Z3H4 446 aa26.7■■□□□ 1.86
SMPD1-204ENST00000530395 GREM2Q9H772 168 aa26.7■■□□□ 1.86
SMPD1-204ENST00000530395 H7C1W4 665 aa26.69■■□□□ 1.86
SMPD1-204ENST00000530395 GRM1Q13255 1194 aa26.69■■□□□ 1.86
SMPD1-204ENST00000530395 DNAAF4Q8WXU2 420 aa26.69■■□□□ 1.86
SMPD1-204ENST00000530395 ZNF408Q9H9D4 720 aa26.69■■□□□ 1.86
SMPD1-204ENST00000530395 PRDM10Q9NQV6 1147 aa26.69■■□□□ 1.86
SMPD1-204ENST00000530395 VAMP4O75379 141 aa26.68■■□□□ 1.86
SMPD1-204ENST00000530395 VIL1P09327 827 aaKnown RBP26.68■■□□□ 1.86
SMPD1-204ENST00000530395 EXOSC9Q06265 439 aaKnown RBP26.68■■□□□ 1.86
SMPD1-204ENST00000530395 GCKRQ14397 625 aa26.68■■□□□ 1.86
SMPD1-204ENST00000530395 CYP4F22Q6NT55 531 aa26.68■■□□□ 1.86
SMPD1-204ENST00000530395 BSDC1Q9NW68 430 aaPredicted RBP26.68■■□□□ 1.86
SMPD1-204ENST00000530395 POLR2AP24928 1970 aaKnown RBP26.67■■□□□ 1.86
SMPD1-204ENST00000530395 SAPCD2Q86UD0 394 aa26.67■■□□□ 1.86
SMPD1-204ENST00000530395 LINS1Q8NG48 757 aa26.67■■□□□ 1.86
SMPD1-204ENST00000530395 ZNF609O15014 1411 aa26.66■■□□□ 1.86
SMPD1-204ENST00000530395 CAPN15O75808 1086 aa26.66■■□□□ 1.86
SMPD1-204ENST00000530395 IGHMBP2P38935 993 aaKnown RBP26.66■■□□□ 1.86
SMPD1-204ENST00000530395 RBM26Q5T8P6 1007 aaKnown RBP26.66■■□□□ 1.86
SMPD1-204ENST00000530395 USP48Q86UV5 1035 aa26.66■■□□□ 1.86
SMPD1-204ENST00000530395 FAM9BQ8IZU0 186 aa26.66■■□□□ 1.86
SMPD1-204ENST00000530395 KIF4BQ2VIQ3 1234 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 DCPSQ96C86 337 aaKnown RBP26.65■■□□□ 1.86
SMPD1-204ENST00000530395 HHIPL1Q96JK4 782 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 BEGAINQ9BUH8 593 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 PLA2G12BQ9BX93 195 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 MINPP1Q9UNW1 487 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 MED23Q9ULK4 1368 aa26.65■■□□□ 1.86
SMPD1-204ENST00000530395 RSBN1LQ6PCB5 846 aaPredicted RBP26.64■■□□□ 1.86
SMPD1-204ENST00000530395 KRT26Q7Z3Y9 468 aa26.64■■□□□ 1.86
SMPD1-204ENST00000530395 PODNQ7Z5L7 613 aa26.64■■□□□ 1.86
SMPD1-204ENST00000530395 AGBL3Q8NEM8 1001 aa26.64■■□□□ 1.86
SMPD1-204ENST00000530395 EGFRP00533 1210 aa26.63■■□□□ 1.85
SMPD1-204ENST00000530395 MAP2K2P36507 400 aa26.62■■□□□ 1.85
SMPD1-204ENST00000530395 CCT4P50991 539 aaKnown RBP26.62■■□□□ 1.85
SMPD1-204ENST00000530395 LBX1P52954 281 aa26.62■■□□□ 1.85
SMPD1-204ENST00000530395 USP17L3A6NCW0 530 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 USP17L4A6NCW7 530 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 ITGA6P23229 1130 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 CASP7P55210 303 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 FAM161AQ3B820 660 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 USP17L1Q7RTZ2 530 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 MPHOSPH8Q99549 860 aa26.61■■□□□ 1.85
SMPD1-204ENST00000530395 HSPA8P11142 646 aaKnown RBP26.6■■□□□ 1.85
SMPD1-204ENST00000530395 ANKRD2Q9GZV1 360 aa26.6■■□□□ 1.85
SMPD1-204ENST00000530395 ZNF280AP59817 542 aaPredicted RBP26.59■■□□□ 1.85
SMPD1-204ENST00000530395 SULF1Q8IWU6 871 aa26.59■■□□□ 1.85
SMPD1-204ENST00000530395 SPINK5Q9NQ38 1064 aaPredicted RBP26.59■■□□□ 1.85
SMPD1-204ENST00000530395 GGA3Q9NZ52 723 aa26.59■■□□□ 1.85
SMPD1-204ENST00000530395 LEMD3Q9Y2U8 911 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms