RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 TOM1O60784 492 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 CKAP4Q07065 602 aaKnown RBP17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 CTAGE1Q96RT6 745 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 HAND2P61296 217 aa17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 HLTFQ14527 1009 aaKnown RBP eCLIP17.68■□□□□ 0.42
PCDHA4-203ENST00000530339 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 SPECC1Q5M775 1068 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 STXBP4Q6ZWJ1 553 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 FOXO3O43524 673 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 IL15P40933 162 aaPredicted RBP17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 DNA2P51530 1060 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 MCM6Q14566 821 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 ADGRL2O95490 1459 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 GSTO1P78417 241 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 SPAG1Q07617 926 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 NPATQ14207 1427 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 CHMLP26374 656 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 ZMYM4Q5VZL5 1548 aa17.67■□□□□ 0.42
PCDHA4-203ENST00000530339 TRAF1Q13077 416 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 TRPM2O94759 1503 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 MCMDC2Q4G0Z9 681 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 CEP112Q8N8E3 955 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 LIG1P18858 919 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 TUBB4BP68371 445 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 CETN1Q12798 172 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 Q6ZUG5 572 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 ABCC1P33527 1531 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 GRM8O00222 908 aa17.66■□□□□ 0.42
PCDHA4-203ENST00000530339 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 GOLGA1Q92805 767 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 SLC26A6Q9BXS9 759 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 CCDC175P0C221 793 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 ATL3Q6DD88 541 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 ASXL2Q76L83 1435 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 RTL1A6NKG5 1358 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 GCOM1H8Y6P7 765 aaPredicted RBP17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 MYZAPP0CAP1 466 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 PPP4R3AQ6IN85 833 aa17.65■□□□□ 0.42
PCDHA4-203ENST00000530339 FBLN1P23142 703 aa17.64■□□□□ 0.42
PCDHA4-203ENST00000530339 LMOD1P29536 600 aaPredicted RBP17.64■□□□□ 0.42
PCDHA4-203ENST00000530339 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.42
PCDHA4-203ENST00000530339 GNAQP50148 359 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 LINS1Q8NG48 757 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 UBA7P41226 1012 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 MNAT1P51948 309 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 KAT14Q9H8E8 782 aa17.64■□□□□ 0.41
PCDHA4-203ENST00000530339 IBSPP21815 317 aaPredicted RBP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 CRNKL1Q9BZJ0 848 aaKnown RBP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 SPTLC2O15270 562 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 POLKQ9UBT6 870 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 IFI16Q16666 785 aaKnown RBP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 MYRIPQ8NFW9 859 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 CYLC1P35663 651 aaPredicted RBP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 MAATS1Q7Z4T9 603 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 RSPH14Q9UHP6 348 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 HSF2BPO75031 334 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
PCDHA4-203ENST00000530339 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 ERO1AQ96HE7 468 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 GOPCQ9HD26 462 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 AOX1Q06278 1338 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 ANXA1P04083 346 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 CAPN2P17655 700 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 NMIQ13287 307 aaPredicted RBP17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 CHPF2Q9P2E5 772 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 AKR1B10O60218 316 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 GNAT2P19087 354 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 PAXIP1Q6ZW49 1069 aaPredicted RBP17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 MATR3P43243 847 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
PCDHA4-203ENST00000530339 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
PCDHA4-203ENST00000530339 ZBTB43O43298 467 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms