RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
USP47-209ENST00000530041 FAM13AO94988 1023 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 PDGFAP04085 211 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 PCSK2P16519 638 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 MZF1P28698 734 aaPredicted RBP9.05□□□□□ -0.96
USP47-209ENST00000530041 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP47-209ENST00000530041 PDE4CQ08493 712 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
USP47-209ENST00000530041 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
USP47-209ENST00000530041 APBA3O96018 575 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 ABL1P00519 1130 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 RAC1P63000 192 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 XKR5Q6UX68 686 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 NACC1Q96RE7 527 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
USP47-209ENST00000530041 ELNP15502 786 aa9.03□□□□□ -0.96
USP47-209ENST00000530041 HYAL2Q12891 473 aa9.03□□□□□ -0.96
USP47-209ENST00000530041 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
USP47-209ENST00000530041 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
USP47-209ENST00000530041 ZNF211Q13398 564 aaPredicted RBP9.02□□□□□ -0.97
USP47-209ENST00000530041 GRIK4Q16099 956 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 COL13A1Q5TAT6 717 aaPredicted RBP9.02□□□□□ -0.97
USP47-209ENST00000530041 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 FMR1NBQ8N0W7 255 aaPredicted RBP9.02□□□□□ -0.97
USP47-209ENST00000530041 DTWD1Q8N5C7 304 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 TTC16Q8NEE8 873 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 GGNBP2Q9H3C7 697 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 ANO2Q9NQ90 1003 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
USP47-209ENST00000530041 KIF4AO95239 1232 aa9.01□□□□□ -0.97
USP47-209ENST00000530041 BAG6P46379 1132 aa9.01□□□□□ -0.97
USP47-209ENST00000530041 AAMPQ13685 434 aa9.01□□□□□ -0.97
USP47-209ENST00000530041 C8orf34Q49A92 452 aa9.01□□□□□ -0.97
USP47-209ENST00000530041 SPACA7Q96KW9 195 aa9.01□□□□□ -0.97
USP47-209ENST00000530041 CYP2E1P05181 493 aaPredicted RBP9□□□□□ -0.97
USP47-209ENST00000530041 A6NHS1 94 aa8.99□□□□□ -0.97
USP47-209ENST00000530041 ICMTO60725 284 aa8.99□□□□□ -0.97
USP47-209ENST00000530041 GATA4P43694 442 aa8.99□□□□□ -0.97
USP47-209ENST00000530041 GDF6Q6KF10 455 aaPredicted RBP8.99□□□□□ -0.97
USP47-209ENST00000530041 CNTN3Q9P232 1028 aa8.99□□□□□ -0.97
USP47-209ENST00000530041 C9orf172C9J069 976 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 FZD6O60353 706 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 SELPP16109 830 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 USP5P45974 858 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 EHHADHQ08426 723 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 CACTIN-AS1Q8N1I8 211 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 TRIM33Q9UPN9 1127 aa8.98□□□□□ -0.97
USP47-209ENST00000530041 SERPINB4P48594 390 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 ATP11AP98196 1134 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 NCAPG2Q86XI2 1143 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 IL22RA1Q8N6P7 574 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 CEP120Q8N960 986 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 C1orf127Q8N9H9 656 aa8.97□□□□□ -0.97
USP47-209ENST00000530041 LENG1Q96BZ8 264 aaPredicted RBP8.97□□□□□ -0.97
USP47-209ENST00000530041 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
USP47-209ENST00000530041 CES1P23141 567 aa8.96□□□□□ -0.98
USP47-209ENST00000530041 PMEPA1Q969W9 287 aa8.96□□□□□ -0.98
USP47-209ENST00000530041 CCDC87Q9NVE4 849 aa8.96□□□□□ -0.98
USP47-209ENST00000530041 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
USP47-209ENST00000530041 SALL4Q9UJQ4 1053 aa8.96□□□□□ -0.98
USP47-209ENST00000530041 H3BRB1 525 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 NRG1Q02297 640 aaPredicted RBP8.95□□□□□ -0.98
USP47-209ENST00000530041 ADGRE1Q14246 886 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 SHISA2Q6UWI4 295 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 GJD3Q8N144 294 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 PBX4Q9BYU1 374 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 RASSF4Q9H2L5 321 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 CHRDQ9H2X0 955 aa8.95□□□□□ -0.98
USP47-209ENST00000530041 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
USP47-209ENST00000530041 DEAF1O75398 565 aaPredicted RBP8.94□□□□□ -0.98
USP47-209ENST00000530041 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
USP47-209ENST00000530041 ECM1Q16610 540 aa8.94□□□□□ -0.98
USP47-209ENST00000530041 MUC3BQ9H195 1237 aa8.94□□□□□ -0.98
USP47-209ENST00000530041 SRA1Q9HD15 236 aaKnown RBP8.94□□□□□ -0.98
USP47-209ENST00000530041 TNFRSF21O75509 655 aa8.93□□□□□ -0.98
USP47-209ENST00000530041 MBTPS1Q14703 1052 aa8.93□□□□□ -0.98
USP47-209ENST00000530041 SNX29Q8TEQ0 813 aa8.93□□□□□ -0.98
USP47-209ENST00000530041 PPME1Q9Y570 386 aa8.93□□□□□ -0.98
USP47-209ENST00000530041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
USP47-209ENST00000530041 ADAM23O75077 832 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 FURINP09958 794 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 DOC2BQ14184 412 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 MAP4K3Q8IVH8 894 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 CCER1Q8TC90 406 aaPredicted RBP8.92□□□□□ -0.98
USP47-209ENST00000530041 LACRTQ9GZZ8 138 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 USP21Q9UK80 565 aa8.92□□□□□ -0.98
USP47-209ENST00000530041 DLL1O00548 723 aa8.91□□□□□ -0.98
USP47-209ENST00000530041 PHACTR2O75167 634 aa8.91□□□□□ -0.98
USP47-209ENST00000530041 ARHGAP4P98171 946 aa8.91□□□□□ -0.98
USP47-209ENST00000530041 FOXD3Q9UJU5 478 aaPredicted RBP8.91□□□□□ -0.98
USP47-209ENST00000530041 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
USP47-209ENST00000530041 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
USP47-209ENST00000530041 CDC27P30260 824 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms