RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 SLC9C2Q5TAH2 1124 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 DDX11Q96FC9 970 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 FAM89AQ96GI7 184 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 SUCLG2Q96I99 432 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 PCMTD1Q96MG8 357 aaPredicted RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 CEP89Q96ST8 783 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 FPGT-TNNI3KV9GXZ4 949 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 PTPRUQ92729 1446 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 SPDYE4A6NLX3 237 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 KDM4AO75164 1064 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 CEBPZQ03701 1054 aaKnown RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 TMEM67Q5HYA8 995 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 DENND2AQ9ULE3 1009 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 KCNQ3O43525 872 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 NBPF7P0C2Y1 421 aaPredicted RBP5.46□□□□□ -1.53
CASP4-207ENST00000529565 BEND3Q5T5X7 828 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 FLAD1Q8NFF5 587 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 CCDC12Q8WUD4 166 aaPredicted RBP5.46□□□□□ -1.53
CASP4-207ENST00000529565 ESR2Q92731 530 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 USP44Q9H0E7 712 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 STK32BQ9NY57 414 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 CCDC39Q9UFE4 941 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 USP16Q9Y5T5 823 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 C1orf167Q5SNV9 1468 aa5.46□□□□□ -1.53
CASP4-207ENST00000529565 STIM1Q13586 685 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 FILIP1LQ4L180 1135 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 CERS3Q8IU89 383 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 ZC3H12CQ9C0D7 883 aaKnown RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 NUP62CLQ9H1M0 184 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 NCOA3Q9Y6Q9 1424 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 CEP170BQ9Y4F5 1589 aaPredicted RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 MROH5Q6ZUA9 1318 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 IQGAP1P46940 1657 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 A0A1B0GUL7 405 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 MPHOSPH10O00566 681 aaKnown RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 PCCAP05165 728 aaPredicted RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 IARSP41252 1262 aaKnown RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 CCAR1Q8IX12 1150 aaKnown RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 DHX37Q8IY37 1157 aaKnown RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 CCDC171Q6TFL3 1326 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 TSPY2A6NKD2 308 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 POLD1P28340 1107 aa5.46□□□□□ -1.54
CASP4-207ENST00000529565 IL6STP40189 918 aaPredicted RBP5.46□□□□□ -1.54
CASP4-207ENST00000529565 MAGEB6P1A0A0J9YX57 407 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 PNMA6EA0A0J9YXQ4 647 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 STX6O43752 255 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 MYO1BO43795 1136 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 GNAQP50148 359 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 METAP2P50579 478 aaKnown RBP eCLIP5.45□□□□□ -1.54
CASP4-207ENST00000529565 TRAF1Q13077 416 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 LPIN2Q92539 896 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 TMX3Q96JJ7 454 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 ZSCAN16Q9H4T2 348 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 KAT14Q9H8E8 782 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CABP5Q9NP86 173 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 BMP2KQ9NSY1 1161 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 MAP3K15Q6ZN16 1313 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 ADGRB1O14514 1584 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 KRT18P05783 430 aaKnown RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 LOC102724428A0A0B4J2F2 783 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 SSFA2P28290 1259 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 GJB2P29033 226 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 SIK1P57059 783 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 HAND2P61296 217 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 WTAPQ15007 396 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 ILDR1Q86SU0 546 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 UNC5CLQ8IV45 518 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CEP57L1Q8IYX8 460 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 PROM2Q8N271 834 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 ZBTB38Q8NAP3 1195 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 USP26Q9BXU7 913 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 TRIM5Q9C035 493 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 RBM27Q9P2N5 1060 aaKnown RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 MAGEC2Q9UBF1 373 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 TMEM131LA2VDJ0 1609 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CTAGE5O15320 804 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 SMC2O95347 1197 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CALM1P0DP23 149 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CALM2P0DP24 149 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CALM3P0DP25 149 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 CCDC173Q0VFZ6 552 aa5.45□□□□□ -1.54
CASP4-207ENST00000529565 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 NSFL1CQ9UNZ2 370 aaKnown RBP5.45□□□□□ -1.54
CASP4-207ENST00000529565 HEG1Q9ULI3 1381 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 LDHBP07195 334 aaKnown RBP5.44□□□□□ -1.54
CASP4-207ENST00000529565 HCLS1P14317 486 aaPredicted RBP5.44□□□□□ -1.54
CASP4-207ENST00000529565 ATP5JP18859 108 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 RBM25P49756 843 aaKnown RBP5.44□□□□□ -1.54
CASP4-207ENST00000529565 CTSWP56202 376 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 NKX1-1Q15270 411 aaPredicted RBP5.44□□□□□ -1.54
CASP4-207ENST00000529565 MAP3K11Q16584 847 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 CREB3L3Q68CJ9 461 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 ZNF772Q68DY9 489 aaPredicted RBP5.44□□□□□ -1.54
CASP4-207ENST00000529565 FERMT3Q86UX7 667 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 RNF214Q8ND24 703 aa5.44□□□□□ -1.54
CASP4-207ENST00000529565 HELBQ8NG08 1087 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms