RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
VPS11-203ENST00000529545 KRT26Q7Z3Y9 468 aa11.81□□□□□ -0.52
VPS11-203ENST00000529545 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
VPS11-203ENST00000529545 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
VPS11-203ENST00000529545 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
VPS11-203ENST00000529545 GBA2Q9HCG7 927 aaPredicted RBP11.81□□□□□ -0.52
VPS11-203ENST00000529545 LAMB2P55268 1798 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 SAGE1Q9NXZ1 904 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
VPS11-203ENST00000529545 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
VPS11-203ENST00000529545 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
VPS11-203ENST00000529545 ZNF157P51786 506 aaPredicted RBP11.79□□□□□ -0.52
VPS11-203ENST00000529545 AIMP1Q12904 312 aaKnown RBP11.79□□□□□ -0.52
VPS11-203ENST00000529545 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
VPS11-203ENST00000529545 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
VPS11-203ENST00000529545 COPS6Q7L5N1 327 aa11.79□□□□□ -0.52
VPS11-203ENST00000529545 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
VPS11-203ENST00000529545 ZIC5Q96T25 663 aa11.79□□□□□ -0.52
VPS11-203ENST00000529545 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
VPS11-203ENST00000529545 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 PSMD14O00487 310 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 ANXA1P04083 346 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 TIE1P35590 1138 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
VPS11-203ENST00000529545 PDIA6Q15084 440 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 TBC1D10BQ4KMP7 808 aaPredicted RBP11.78□□□□□ -0.52
VPS11-203ENST00000529545 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 XAGE3Q8WTP9 111 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 PLEKHF1Q96S99 279 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 EYA3Q99504 573 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
VPS11-203ENST00000529545 G3V3G9 751 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 TRPA1O75762 1119 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 RNF186Q9NXI6 227 aa11.77□□□□□ -0.53
VPS11-203ENST00000529545 TAF1P21675 1872 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
VPS11-203ENST00000529545 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
VPS11-203ENST00000529545 ADM5C9JUS6 153 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
VPS11-203ENST00000529545 SOX10P56693 466 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 LHX8Q68G74 356 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
VPS11-203ENST00000529545 LRRC37AA6NMS7 1700 aa11.75□□□□□ -0.53
VPS11-203ENST00000529545 ECE2O60344 883 aa11.75□□□□□ -0.53
VPS11-203ENST00000529545 RIPK4P57078 832 aa11.75□□□□□ -0.53
VPS11-203ENST00000529545 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
VPS11-203ENST00000529545 CTU1Q7Z7A3 348 aaKnown RBP11.75□□□□□ -0.53
VPS11-203ENST00000529545 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
VPS11-203ENST00000529545 PDE4DIPQ5VU43 2346 aa11.75□□□□□ -0.53
VPS11-203ENST00000529545 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
VPS11-203ENST00000529545 SF3B3Q15393 1217 aaKnown RBP11.74□□□□□ -0.53
VPS11-203ENST00000529545 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
VPS11-203ENST00000529545 CELF1Q92879 486 aaKnown RBP11.74□□□□□ -0.53
VPS11-203ENST00000529545 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
VPS11-203ENST00000529545 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
VPS11-203ENST00000529545 EGFRP00533 1210 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 SLC10A3P09131 477 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 GPSM2P81274 684 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 POLLQ9UGP5 575 aa11.73□□□□□ -0.53
VPS11-203ENST00000529545 PYGBP11216 843 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
VPS11-203ENST00000529545 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
VPS11-203ENST00000529545 FKBP1BP68106 108 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 PKN2Q16513 984 aaKnown RBP11.72□□□□□ -0.53
VPS11-203ENST00000529545 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
VPS11-203ENST00000529545 TBC1D16Q8TBP0 767 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 ZNF428Q96B54 188 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 CDCA5Q96FF9 252 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 KCNQ5Q9NR82 932 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
VPS11-203ENST00000529545 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
VPS11-203ENST00000529545 RTL9Q8NET4 1388 aa11.71□□□□□ -0.53
VPS11-203ENST00000529545 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
VPS11-203ENST00000529545 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
VPS11-203ENST00000529545 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.53
VPS11-203ENST00000529545 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
VPS11-203ENST00000529545 ISCA1Q9BUE6 129 aa11.71□□□□□ -0.53
VPS11-203ENST00000529545 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
VPS11-203ENST00000529545 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
VPS11-203ENST00000529545 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
VPS11-203ENST00000529545 UFL1O94874 794 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms