RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ISCA1Q9BUE6 129 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 RNF186Q9NXI6 227 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
HIF3A-212ENST00000529205 CHL1O00533 1208 aa17.56■□□□□ 0.4
HIF3A-212ENST00000529205 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-212ENST00000529205 VIL1P09327 827 aaKnown RBP17.56■□□□□ 0.4
HIF3A-212ENST00000529205 HOXB7P09629 217 aa17.56■□□□□ 0.4
HIF3A-212ENST00000529205 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-212ENST00000529205 GGA3Q9NZ52 723 aa17.56■□□□□ 0.4
HIF3A-212ENST00000529205 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
HIF3A-212ENST00000529205 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
HIF3A-212ENST00000529205 EGFRP00533 1210 aa17.55■□□□□ 0.4
HIF3A-212ENST00000529205 SLC10A3P09131 477 aa17.55■□□□□ 0.4
HIF3A-212ENST00000529205 RALBP1Q15311 655 aa17.55■□□□□ 0.4
HIF3A-212ENST00000529205 KCNQ5Q9NR82 932 aa17.55■□□□□ 0.4
HIF3A-212ENST00000529205 FKBP1BP68106 108 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 AGBL3Q8NEM8 1001 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 GGA1Q9UJY5 639 aa17.54■□□□□ 0.4
HIF3A-212ENST00000529205 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
HIF3A-212ENST00000529205 UFL1O94874 794 aa17.53■□□□□ 0.4
HIF3A-212ENST00000529205 TRIM28Q13263 835 aaKnown RBP17.53■□□□□ 0.4
HIF3A-212ENST00000529205 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
HIF3A-212ENST00000529205 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
HIF3A-212ENST00000529205 SOX10P56693 466 aa17.52■□□□□ 0.4
HIF3A-212ENST00000529205 GOLGA2Q08379 1002 aa17.52■□□□□ 0.4
HIF3A-212ENST00000529205 SCARF1Q14162 830 aa17.52■□□□□ 0.4
HIF3A-212ENST00000529205 ANGEL2Q5VTE6 544 aaKnown RBP17.52■□□□□ 0.4
HIF3A-212ENST00000529205 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
HIF3A-212ENST00000529205 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
HIF3A-212ENST00000529205 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.39
HIF3A-212ENST00000529205 TAF1P21675 1872 aa17.52■□□□□ 0.39
HIF3A-212ENST00000529205 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
HIF3A-212ENST00000529205 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
HIF3A-212ENST00000529205 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
HIF3A-212ENST00000529205 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
HIF3A-212ENST00000529205 ZNF280AP59817 542 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-212ENST00000529205 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
HIF3A-212ENST00000529205 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
HIF3A-212ENST00000529205 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
HIF3A-212ENST00000529205 RASAL3Q86YV0 1011 aa17.49■□□□□ 0.39
HIF3A-212ENST00000529205 MYOZ2Q9NPC6 264 aa17.49■□□□□ 0.39
HIF3A-212ENST00000529205 PITPNM2Q9BZ72 1349 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 PDE8AO60658 829 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 NF2P35240 595 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
HIF3A-212ENST00000529205 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-212ENST00000529205 XDHP47989 1333 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-212ENST00000529205 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 OGFOD1Q8N543 542 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 MYD88Q99836 296 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 ZNF609O15014 1411 aa17.47■□□□□ 0.39
HIF3A-212ENST00000529205 PCCAP05165 728 aaPredicted RBP17.46■□□□□ 0.39
HIF3A-212ENST00000529205 PRPF38BQ5VTL8 546 aaKnown RBP17.46■□□□□ 0.39
HIF3A-212ENST00000529205 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
HIF3A-212ENST00000529205 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
HIF3A-212ENST00000529205 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
HIF3A-212ENST00000529205 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-212ENST00000529205 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
HIF3A-212ENST00000529205 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
HIF3A-212ENST00000529205 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
HIF3A-212ENST00000529205 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 TBC1D8O95759 1140 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 SREBF2Q12772 1141 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 ZNF296Q8WUU4 475 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-212ENST00000529205 CCDC85AQ96PX6 553 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-212ENST00000529205 GMLQ99445 158 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
HIF3A-212ENST00000529205 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
HIF3A-212ENST00000529205 MMP14P50281 582 aa17.42■□□□□ 0.38
HIF3A-212ENST00000529205 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
HIF3A-212ENST00000529205 TM4SF4P48230 202 aa17.41■□□□□ 0.38
HIF3A-212ENST00000529205 GNAI1P63096 354 aa17.41■□□□□ 0.38
HIF3A-212ENST00000529205 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
HIF3A-212ENST00000529205 ARMC9Q7Z3E5 817 aa17.41■□□□□ 0.38
HIF3A-212ENST00000529205 METTL22Q9BUU2 404 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-212ENST00000529205 COL4A1P02462 1669 aa17.41■□□□□ 0.38
HIF3A-212ENST00000529205 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
HIF3A-212ENST00000529205 NBPF9Q3BBW0 867 aa17.4■□□□□ 0.38
HIF3A-212ENST00000529205 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
HIF3A-212ENST00000529205 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
HIF3A-212ENST00000529205 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms