RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 EYA3Q99504 573 aa18.59■□□□□ 0.57
TRIM3-208ENST00000529058 POLLQ9UGP5 575 aa18.59■□□□□ 0.57
TRIM3-208ENST00000529058 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
TRIM3-208ENST00000529058 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
TRIM3-208ENST00000529058 CFHR5Q9BXR6 569 aa18.58■□□□□ 0.56
TRIM3-208ENST00000529058 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
TRIM3-208ENST00000529058 UBE2Q2LH0YL09 131 aa18.57■□□□□ 0.56
TRIM3-208ENST00000529058 HSP90AB3PQ58FF7 597 aa18.57■□□□□ 0.56
TRIM3-208ENST00000529058 LRP10Q7Z4F1 713 aa18.57■□□□□ 0.56
TRIM3-208ENST00000529058 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
TRIM3-208ENST00000529058 BRCA2P51587 3418 aa18.56■□□□□ 0.56
TRIM3-208ENST00000529058 PSME4Q14997 1843 aa18.56■□□□□ 0.56
TRIM3-208ENST00000529058 PITPNM2Q9BZ72 1349 aa18.56■□□□□ 0.56
TRIM3-208ENST00000529058 ZNF280AP59817 542 aaPredicted RBP18.56■□□□□ 0.56
TRIM3-208ENST00000529058 SREBF2Q12772 1141 aa18.56■□□□□ 0.56
TRIM3-208ENST00000529058 R3HDMLQ9H3Y0 253 aa18.56■□□□□ 0.56
TRIM3-208ENST00000529058 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
TRIM3-208ENST00000529058 GPSM2P81274 684 aa18.55■□□□□ 0.56
TRIM3-208ENST00000529058 CELF1Q92879 486 aaKnown RBP18.55■□□□□ 0.56
TRIM3-208ENST00000529058 ZNF609O15014 1411 aa18.55■□□□□ 0.56
TRIM3-208ENST00000529058 SZT2Q5T011 3432 aa18.54■□□□□ 0.56
TRIM3-208ENST00000529058 MKRN3Q13064 507 aaKnown RBP18.54■□□□□ 0.56
TRIM3-208ENST00000529058 PDIA6Q15084 440 aa18.54■□□□□ 0.56
TRIM3-208ENST00000529058 AGBL3Q8NEM8 1001 aa18.54■□□□□ 0.56
TRIM3-208ENST00000529058 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
TRIM3-208ENST00000529058 TTLL12Q14166 644 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-208ENST00000529058 TBC1D16Q8TBP0 767 aa18.53■□□□□ 0.56
TRIM3-208ENST00000529058 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
TRIM3-208ENST00000529058 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
TRIM3-208ENST00000529058 COLQQ9Y215 455 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-208ENST00000529058 TRIOBPQ9H2D6 2365 aa18.53■□□□□ 0.56
TRIM3-208ENST00000529058 TCIRG1Q13488 830 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 RSBN1LQ6PCB5 846 aaPredicted RBP18.52■□□□□ 0.56
TRIM3-208ENST00000529058 OTOP1Q7RTM1 612 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 MYOZ2Q9NPC6 264 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 COL4A1P02462 1669 aa18.52■□□□□ 0.56
TRIM3-208ENST00000529058 CEP290O15078 2479 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 G3V3G9 751 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 ALDH1A1P00352 501 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 ANXA1P04083 346 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
TRIM3-208ENST00000529058 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 PRAMEF18Q5VWM3 479 aa18.51■□□□□ 0.55
TRIM3-208ENST00000529058 USP17L8P0C7I0 530 aa18.5■□□□□ 0.55
TRIM3-208ENST00000529058 EN2P19622 333 aaPredicted RBP18.5■□□□□ 0.55
TRIM3-208ENST00000529058 SF3B3Q15393 1217 aaKnown RBP18.5■□□□□ 0.55
TRIM3-208ENST00000529058 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
TRIM3-208ENST00000529058 NF2P35240 595 aa18.49■□□□□ 0.55
TRIM3-208ENST00000529058 GMLQ99445 158 aa18.49■□□□□ 0.55
TRIM3-208ENST00000529058 DLL1O00548 723 aa18.48■□□□□ 0.55
TRIM3-208ENST00000529058 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
TRIM3-208ENST00000529058 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
TRIM3-208ENST00000529058 NEFMP07197 916 aa18.47■□□□□ 0.55
TRIM3-208ENST00000529058 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
TRIM3-208ENST00000529058 XAGE3Q8WTP9 111 aa18.47■□□□□ 0.55
TRIM3-208ENST00000529058 ARMC5Q96C12 935 aa18.47■□□□□ 0.55
TRIM3-208ENST00000529058 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
TRIM3-208ENST00000529058 PTPN22Q9Y2R2 807 aa18.47■□□□□ 0.55
TRIM3-208ENST00000529058 UFL1O94874 794 aa18.46■□□□□ 0.55
TRIM3-208ENST00000529058 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
TRIM3-208ENST00000529058 LAMB1P07942 1786 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 NBPF9Q3BBW0 867 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 SPRYD7Q5W111 196 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 ARMC9Q7Z3E5 817 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
TRIM3-208ENST00000529058 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 ERO1AQ96HE7 468 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 ANKIB1Q9P2G1 1089 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 GGA1Q9UJY5 639 aa18.45■□□□□ 0.54
TRIM3-208ENST00000529058 INHBEP58166 350 aa18.44■□□□□ 0.54
TRIM3-208ENST00000529058 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
TRIM3-208ENST00000529058 TMEM106CQ9BVX2 250 aa18.44■□□□□ 0.54
TRIM3-208ENST00000529058 MANSC4A6NHS7 340 aaPredicted RBP18.43■□□□□ 0.54
TRIM3-208ENST00000529058 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
TRIM3-208ENST00000529058 PRKG1Q13976 671 aa18.43■□□□□ 0.54
TRIM3-208ENST00000529058 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 CD99L2Q8TCZ2 262 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 OTUD5Q96G74 571 aa18.42■□□□□ 0.54
TRIM3-208ENST00000529058 WNT10BO00744 389 aa18.41■□□□□ 0.54
TRIM3-208ENST00000529058 PODNQ7Z5L7 613 aa18.41■□□□□ 0.54
TRIM3-208ENST00000529058 SLC17A8Q8NDX2 589 aa18.41■□□□□ 0.54
TRIM3-208ENST00000529058 ISCA1Q9BUE6 129 aa18.41■□□□□ 0.54
TRIM3-208ENST00000529058 EFCC1Q9HA90 598 aa18.41■□□□□ 0.54
TRIM3-208ENST00000529058 ANGEL1Q9UNK9 670 aaKnown RBP18.41■□□□□ 0.54
TRIM3-208ENST00000529058 ZNF646O15015 1829 aaPredicted RBP18.4■□□□□ 0.54
TRIM3-208ENST00000529058 H0YGN5 161 aa18.4■□□□□ 0.54
TRIM3-208ENST00000529058 IGF2BP3O00425 579 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM3-208ENST00000529058 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-208ENST00000529058 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-208ENST00000529058 OGFOD1Q8N543 542 aa18.39■□□□□ 0.53
TRIM3-208ENST00000529058 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
TRIM3-208ENST00000529058 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
TRIM3-208ENST00000529058 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms