RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
CAPN1-216ENST00000528739 FAM161AQ3B820 660 aa18.08■□□□□ 0.48
CAPN1-216ENST00000528739 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
CAPN1-216ENST00000528739 PLA2G12BQ9BX93 195 aa18.08■□□□□ 0.48
CAPN1-216ENST00000528739 COL4A5P29400 1685 aa18.07■□□□□ 0.48
CAPN1-216ENST00000528739 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
CAPN1-216ENST00000528739 EPS15P42566 896 aa18.07■□□□□ 0.48
CAPN1-216ENST00000528739 CASP7P55210 303 aa18.07■□□□□ 0.48
CAPN1-216ENST00000528739 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
CAPN1-216ENST00000528739 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-216ENST00000528739 PTPRCP08575 1304 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 XDHP47989 1333 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 ECE2O60344 883 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 IFIT5Q13325 482 aaKnown RBP18.06■□□□□ 0.48
CAPN1-216ENST00000528739 ALDH1L2Q3SY69 923 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 PODXL2Q9NZ53 605 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 MINPP1Q9UNW1 487 aa18.06■□□□□ 0.48
CAPN1-216ENST00000528739 KCNJ4P48050 445 aa18.05■□□□□ 0.48
CAPN1-216ENST00000528739 GMPSP49915 693 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-216ENST00000528739 SCNN1DP51172 638 aa18.05■□□□□ 0.48
CAPN1-216ENST00000528739 CCDC57Q2TAC2 916 aa18.05■□□□□ 0.48
CAPN1-216ENST00000528739 LMBR1LQ6UX01 489 aa18.05■□□□□ 0.48
CAPN1-216ENST00000528739 YDJCA8MPS7 323 aa18.04■□□□□ 0.48
CAPN1-216ENST00000528739 CSF1RP07333 972 aa18.04■□□□□ 0.48
CAPN1-216ENST00000528739 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
CAPN1-216ENST00000528739 COL4A1P02462 1669 aa18.03■□□□□ 0.48
CAPN1-216ENST00000528739 PSMD14O00487 310 aa18.03■□□□□ 0.48
CAPN1-216ENST00000528739 CT47B1P0C2W7 299 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-216ENST00000528739 FOXO4P98177 505 aa18.03■□□□□ 0.48
CAPN1-216ENST00000528739 MAP1SQ66K74 1059 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-216ENST00000528739 GPRC5DQ9NZD1 345 aa18.03■□□□□ 0.48
CAPN1-216ENST00000528739 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-216ENST00000528739 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
CAPN1-216ENST00000528739 CACNA1FO60840 1977 aa18.02■□□□□ 0.48
CAPN1-216ENST00000528739 H7C1D1 291 aa18.02■□□□□ 0.48
CAPN1-216ENST00000528739 CCT4P50991 539 aaKnown RBP18.02■□□□□ 0.48
CAPN1-216ENST00000528739 USP50Q70EL3 339 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-216ENST00000528739 FBXW7Q969H0 707 aa18.02■□□□□ 0.48
CAPN1-216ENST00000528739 ANKRD2Q9GZV1 360 aa18.02■□□□□ 0.48
CAPN1-216ENST00000528739 KCNQ5Q9NR82 932 aa18.02■□□□□ 0.48
CAPN1-216ENST00000528739 ADARB2Q9NS39 739 aaKnown RBP18.02■□□□□ 0.48
CAPN1-216ENST00000528739 CNOT7Q9UIV1 285 aaKnown RBP18.02■□□□□ 0.48
CAPN1-216ENST00000528739 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
CAPN1-216ENST00000528739 PLIN1O60240 522 aa18.01■□□□□ 0.47
CAPN1-216ENST00000528739 EPHA10Q5JZY3 1008 aa18.01■□□□□ 0.47
CAPN1-216ENST00000528739 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
CAPN1-216ENST00000528739 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
CAPN1-216ENST00000528739 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
CAPN1-216ENST00000528739 NBPF7P0C2Y1 421 aaPredicted RBP18■□□□□ 0.47
CAPN1-216ENST00000528739 CHRNDQ07001 517 aa18■□□□□ 0.47
CAPN1-216ENST00000528739 RBM26Q5T8P6 1007 aaKnown RBP18■□□□□ 0.47
CAPN1-216ENST00000528739 LEMD3Q9Y2U8 911 aa18■□□□□ 0.47
CAPN1-216ENST00000528739 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
CAPN1-216ENST00000528739 WTIPA6NIX2 430 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-216ENST00000528739 LDHAL6AQ6ZMR3 332 aa17.99■□□□□ 0.47
CAPN1-216ENST00000528739 MICALL2Q8IY33 904 aa17.99■□□□□ 0.47
CAPN1-216ENST00000528739 HELBQ8NG08 1087 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-216ENST00000528739 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-216ENST00000528739 SCN4AP35499 1836 aa17.99■□□□□ 0.47
CAPN1-216ENST00000528739 ZNF804BA4D1E1 1349 aa17.98■□□□□ 0.47
CAPN1-216ENST00000528739 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
CAPN1-216ENST00000528739 TAF5LO75529 589 aa17.98■□□□□ 0.47
CAPN1-216ENST00000528739 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
CAPN1-216ENST00000528739 RARSP54136 660 aaKnown RBP17.97■□□□□ 0.47
CAPN1-216ENST00000528739 BICC1Q9H694 974 aaKnown RBP17.97■□□□□ 0.47
CAPN1-216ENST00000528739 SHTN1A0MZ66 631 aa17.96■□□□□ 0.47
CAPN1-216ENST00000528739 RPS12P25398 132 aaKnown RBP17.96■□□□□ 0.47
CAPN1-216ENST00000528739 TBC1D10BQ4KMP7 808 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-216ENST00000528739 PODNQ7Z5L7 613 aa17.96■□□□□ 0.47
CAPN1-216ENST00000528739 DPF2Q92785 391 aa17.96■□□□□ 0.47
CAPN1-216ENST00000528739 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-216ENST00000528739 KLRG1Q96E93 195 aa17.96■□□□□ 0.47
CAPN1-216ENST00000528739 USP17L3A6NCW0 530 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 USP17L4A6NCW7 530 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-216ENST00000528739 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
CAPN1-216ENST00000528739 USP17L1Q7RTZ2 530 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 DNAJC5GQ8N7S2 189 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 TRPM4Q8TD43 1214 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
CAPN1-216ENST00000528739 MYH3P11055 1940 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 TMEM88BA6NKF7 163 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
CAPN1-216ENST00000528739 RSBN1LQ6PCB5 846 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-216ENST00000528739 COA1Q9GZY4 146 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 USP44Q9H0E7 712 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 MKRN1Q9UHC7 482 aaKnown RBP17.94■□□□□ 0.46
CAPN1-216ENST00000528739 UTYO14607 1347 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
CAPN1-216ENST00000528739 SNAP23O00161 211 aa17.93■□□□□ 0.46
CAPN1-216ENST00000528739 UBTFL1P0CB47 393 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-216ENST00000528739 KLRK1P26718 216 aa17.93■□□□□ 0.46
CAPN1-216ENST00000528739 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
CAPN1-216ENST00000528739 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
CAPN1-216ENST00000528739 ABT1Q9ULW3 272 aaKnown RBP17.93■□□□□ 0.46
CAPN1-216ENST00000528739 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
CAPN1-216ENST00000528739 TRAF5O00463 557 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms