RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 ELP1O95163 1332 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 GLI3P10071 1580 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 LIG1P18858 919 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 IL15P40933 162 aaPredicted RBP12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 LRRC2Q9BYS8 371 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
AP002008.3-201ENST00000528614 RRP9O43818 475 aaKnown RBP12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 SPATA32Q96LK8 384 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 SCAND2PQ9GZW5 306 aaPredicted RBP12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 EYA2O00167 538 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 TERF1P54274 439 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 BRF1Q92994 677 aa12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 ZNF830Q96NB3 372 aaPredicted RBP12.44□□□□□ -0.42
AP002008.3-201ENST00000528614 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 CAMK4Q16566 473 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 SCRN1Q12765 414 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
AP002008.3-201ENST00000528614 AP5Z1O43299 807 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 IFIT1P09914 478 aaKnown RBP12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 A0A1B0GUL7 405 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 RESTQ13127 1097 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 MAP3K11Q16584 847 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 DACT1Q9NYF0 836 aa12.42□□□□□ -0.42
AP002008.3-201ENST00000528614 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 H3BQV1 296 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 PFKFB2O60825 505 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 IL2RBP14784 551 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 CIAO1O76071 339 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 HSPD1P10809 573 aaKnown RBP12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 APOBRQ0VD83 1088 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 PGBD1Q96JS3 809 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 ATG3Q9NT62 314 aa12.41□□□□□ -0.42
AP002008.3-201ENST00000528614 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 TNMDQ9H2S6 317 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 E7EWF7 191 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 HSPA2P54652 639 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 TYRO3Q06418 890 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 AEBP2Q6ZN18 517 aaPredicted RBP12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 CARD10Q9BWT7 1032 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 ZSCAN16Q9H4T2 348 aaPredicted RBP12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 CEP126Q9P2H0 1117 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
AP002008.3-201ENST00000528614 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 NSUN7Q8NE18 718 aaKnown RBP12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 MAST3O60307 1309 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 M0R2C6 588 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 STRN4Q9NRL3 753 aa12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
AP002008.3-201ENST00000528614 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 NR1I2O75469 434 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 FOSBP53539 338 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 AGXT2Q9BYV1 514 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 CLSTN2Q9H4D0 955 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 TJP1Q07157 1748 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 EVA1CP58658 441 aa12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 NOLC1Q14978 699 aaKnown RBP eCLIP12.38□□□□□ -0.43
AP002008.3-201ENST00000528614 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms