RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 NUTM2EB1AL46 878 aaPredicted RBP20.78■□□□□ 0.92
LTBP3-210ENST00000528516 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
LTBP3-210ENST00000528516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.78■□□□□ 0.92
LTBP3-210ENST00000528516 NUTM2AQ8IVF1 878 aaPredicted RBP20.78■□□□□ 0.92
LTBP3-210ENST00000528516 RASSF4Q9H2L5 321 aa20.78■□□□□ 0.92
LTBP3-210ENST00000528516 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
LTBP3-210ENST00000528516 METTL24Q5JXM2 366 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 CCDC191Q8NCU4 936 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 CWC15Q9P013 229 aaKnown RBP20.77■□□□□ 0.92
LTBP3-210ENST00000528516 SCAND2PQ9GZW5 306 aaPredicted RBP20.77■□□□□ 0.92
LTBP3-210ENST00000528516 OSBPL3Q9H4L5 887 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 NEMFO60524 1076 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 ANKRD13DQ6ZTN6 518 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 KRT28Q7Z3Y7 464 aa20.77■□□□□ 0.92
LTBP3-210ENST00000528516 SPATA31D1Q6ZQQ2 1576 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 TIMM10P62072 90 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 ERCC4Q92889 916 aaPredicted RBP20.76■□□□□ 0.91
LTBP3-210ENST00000528516 G3V3G9 751 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 DCAF8Q5TAQ9 597 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 KLHL10Q6JEL2 608 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 EVI5LQ96CN4 794 aa20.76■□□□□ 0.91
LTBP3-210ENST00000528516 NAT10Q9H0A0 1025 aaKnown RBP20.76■□□□□ 0.91
LTBP3-210ENST00000528516 KIF6Q6ZMV9 814 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 KCNH5Q8NCM2 988 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 MINDY4BA8MYZ0 360 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 GRM8O00222 908 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 URI1O94763 535 aaPredicted RBP20.75■□□□□ 0.91
LTBP3-210ENST00000528516 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 GOLGA6L1Q8N7Z2 621 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 ORAI2Q96SN7 254 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 ZNF396Q96N95 335 aaPredicted RBP20.75■□□□□ 0.91
LTBP3-210ENST00000528516 MPHOSPH8Q99549 860 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 IL25Q9H293 177 aa20.75■□□□□ 0.91
LTBP3-210ENST00000528516 KIF2AO00139 706 aaPredicted RBP20.74■□□□□ 0.91
LTBP3-210ENST00000528516 RXRAP19793 462 aa20.74■□□□□ 0.91
LTBP3-210ENST00000528516 LMAN1P49257 510 aa20.74■□□□□ 0.91
LTBP3-210ENST00000528516 FEZ2Q9UHY8 353 aaPredicted RBP20.74■□□□□ 0.91
LTBP3-210ENST00000528516 A0A087WWV3 80 aa20.74■□□□□ 0.91
LTBP3-210ENST00000528516 OLFM4Q6UX06 510 aa20.74■□□□□ 0.91
LTBP3-210ENST00000528516 CFAP45Q9UL16 551 aa20.74■□□□□ 0.91
LTBP3-210ENST00000528516 REREQ9P2R6 1566 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 NR1I2O75469 434 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 FSIP1Q8NA03 581 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
LTBP3-210ENST00000528516 CYP2C19P33261 490 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 CLCN6P51797 869 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 MICU3Q86XE3 530 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 ADGRB2O60241 1585 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 HOXC9P31274 260 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 DNAI1Q9UI46 699 aa20.73■□□□□ 0.91
LTBP3-210ENST00000528516 IL17REQ8NFR9 667 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 ATP10DQ9P241 1426 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 TDO2P48775 406 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 GTF2A1P52655 376 aaPredicted RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 CFAP100Q494V2 611 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 PLA2G4DQ86XP0 818 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 AK7Q96M32 723 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 HYPKQ9NX55 129 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 SOS1Q07889 1333 aaPredicted RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 NPHP3Q7Z494 1330 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 NBPF6Q5VWK0 638 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 TDRD7Q8NHU6 1098 aaKnown RBP20.72■□□□□ 0.91
LTBP3-210ENST00000528516 NBPF4Q96M43 638 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 CLSTN2Q9H4D0 955 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 TCHHQ07283 1943 aa20.72■□□□□ 0.91
LTBP3-210ENST00000528516 HSPA2P54652 639 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 KIF24Q5T7B8 1368 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 PLEKHG1Q9ULL1 1385 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 ARHGEF28Q8N1W1 1705 aaKnown RBP20.71■□□□□ 0.91
LTBP3-210ENST00000528516 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 PNMA6AP0CW24 399 aaPredicted RBP20.71■□□□□ 0.91
LTBP3-210ENST00000528516 TSR1Q2NL82 804 aaKnown RBP20.71■□□□□ 0.91
LTBP3-210ENST00000528516 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
LTBP3-210ENST00000528516 CEP57L1Q8IYX8 460 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
LTBP3-210ENST00000528516 GOLGA8BA8MQT2 603 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 Q6ZUG5 572 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 SGSM2O43147 1006 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 OTUD7BQ6GQQ9 843 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 TMC6Q7Z403 805 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 SEC31AO94979 1220 aaKnown RBP20.7■□□□□ 0.9
LTBP3-210ENST00000528516 CPLX3Q8WVH0 158 aa20.7■□□□□ 0.9
LTBP3-210ENST00000528516 ZCCHC17Q9NP64 241 aaKnown RBP20.7■□□□□ 0.9
LTBP3-210ENST00000528516 KRT32Q14532 448 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 GCP02774 474 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 ZSCAN26Q16670 478 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 ME3Q16798 604 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 KSR2Q6VAB6 950 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
LTBP3-210ENST00000528516 U3KPZ7 1027 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms