RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 CNTNAP1P78357 1384 aa15.83■□□□□ 0.12
SCN3B-204ENST00000527836 TRPM7Q96QT4 1865 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 PCNTO95613 3336 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 NEURL1BA8MQ27 555 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 ECE2O60344 883 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
SCN3B-204ENST00000527836 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 GPR101Q96P66 508 aaPredicted RBP15.82■□□□□ 0.12
SCN3B-204ENST00000527836 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
SCN3B-204ENST00000527836 PSMD14O00487 310 aa15.81■□□□□ 0.12
SCN3B-204ENST00000527836 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
SCN3B-204ENST00000527836 MICALL2Q8IY33 904 aa15.81■□□□□ 0.12
SCN3B-204ENST00000527836 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
SCN3B-204ENST00000527836 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-204ENST00000527836 COL4A1P02462 1669 aa15.8■□□□□ 0.12
SCN3B-204ENST00000527836 XDHP47989 1333 aa15.8■□□□□ 0.12
SCN3B-204ENST00000527836 VAMP4O75379 141 aa15.8■□□□□ 0.12
SCN3B-204ENST00000527836 AIDAQ96BJ3 306 aa15.8■□□□□ 0.12
SCN3B-204ENST00000527836 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
SCN3B-204ENST00000527836 TRAF5O00463 557 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
SCN3B-204ENST00000527836 VEGFBP49765 207 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 GCKRQ14397 625 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 LINS1Q8NG48 757 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 TTLL11Q8NHH1 800 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 GREM2Q9H772 168 aa15.79■□□□□ 0.12
SCN3B-204ENST00000527836 H7C1W4 665 aa15.78■□□□□ 0.12
SCN3B-204ENST00000527836 ATP2B4P23634 1241 aa15.78■□□□□ 0.12
SCN3B-204ENST00000527836 RPS12P25398 132 aaKnown RBP15.78■□□□□ 0.12
SCN3B-204ENST00000527836 RBM26Q5T8P6 1007 aaKnown RBP15.78■□□□□ 0.12
SCN3B-204ENST00000527836 ZC3H15Q8WU90 426 aaKnown RBP15.78■□□□□ 0.12
SCN3B-204ENST00000527836 DPF2Q92785 391 aa15.78■□□□□ 0.12
SCN3B-204ENST00000527836 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
SCN3B-204ENST00000527836 RASSF10A6NK89 507 aa15.77■□□□□ 0.12
SCN3B-204ENST00000527836 CELF2O95319 508 aaKnown RBP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 FMR1Q06787 632 aaKnown RBP eCLIP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 COL13A1Q5TAT6 717 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 CDC37L1Q7L3B6 337 aa15.77■□□□□ 0.12
SCN3B-204ENST00000527836 TRPM4Q8TD43 1214 aa15.77■□□□□ 0.12
SCN3B-204ENST00000527836 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
SCN3B-204ENST00000527836 GLIS2Q9BZE0 524 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 KCNQ5Q9NR82 932 aa15.77■□□□□ 0.12
SCN3B-204ENST00000527836 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-204ENST00000527836 SHTN1A0MZ66 631 aa15.76■□□□□ 0.11
SCN3B-204ENST00000527836 ECE1P42892 770 aa15.76■□□□□ 0.11
SCN3B-204ENST00000527836 SAMD7Q7Z3H4 446 aa15.76■□□□□ 0.11
SCN3B-204ENST00000527836 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
SCN3B-204ENST00000527836 POLR2AP24928 1970 aaKnown RBP15.76■□□□□ 0.11
SCN3B-204ENST00000527836 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
SCN3B-204ENST00000527836 F6X3S4 739 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 ITGA6P23229 1130 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 HIRAP54198 1017 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-204ENST00000527836 TNS4Q8IZW8 715 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 DCPSQ96C86 337 aaKnown RBP15.75■□□□□ 0.11
SCN3B-204ENST00000527836 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-204ENST00000527836 SCN9AQ15858 1988 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
SCN3B-204ENST00000527836 VIL1P09327 827 aaKnown RBP15.74■□□□□ 0.11
SCN3B-204ENST00000527836 KCNJ4P48050 445 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 CST9Q5W186 159 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 BEGAINQ9BUH8 593 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 PGAP2Q9UHJ9 254 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
SCN3B-204ENST00000527836 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 CCT4P50991 539 aaKnown RBP15.73■□□□□ 0.11
SCN3B-204ENST00000527836 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-204ENST00000527836 KIF4BQ2VIQ3 1234 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 USP48Q86UV5 1035 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 ANKRD2Q9GZV1 360 aa15.73■□□□□ 0.11
SCN3B-204ENST00000527836 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
SCN3B-204ENST00000527836 USP17L3A6NCW0 530 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 USP17L4A6NCW7 530 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
SCN3B-204ENST00000527836 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 CYP4F22Q6NT55 531 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 RSBN1LQ6PCB5 846 aaPredicted RBP15.72■□□□□ 0.11
SCN3B-204ENST00000527836 USP17L1Q7RTZ2 530 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 LEMD3Q9Y2U8 911 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 TLL2Q9Y6L7 1015 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
SCN3B-204ENST00000527836 PSME4Q14997 1843 aa15.71■□□□□ 0.11
SCN3B-204ENST00000527836 FOXN1O15353 648 aa15.71■□□□□ 0.11
SCN3B-204ENST00000527836 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
SCN3B-204ENST00000527836 SULF1Q8IWU6 871 aa15.71■□□□□ 0.11
SCN3B-204ENST00000527836 ZNF804BA4D1E1 1349 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 CSF1RP07333 972 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 USP17L8P0C7I0 530 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 CASP7P55210 303 aa15.7■□□□□ 0.1
SCN3B-204ENST00000527836 CCDC57Q2TAC2 916 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms