RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GNAT2P19087 354 aa17.63■□□□□ 0.41
USP47-207ENST00000527733 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
USP47-207ENST00000527733 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
USP47-207ENST00000527733 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
USP47-207ENST00000527733 CNNM2Q9H8M5 875 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
USP47-207ENST00000527733 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
USP47-207ENST00000527733 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
USP47-207ENST00000527733 ESR2Q92731 530 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
USP47-207ENST00000527733 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
USP47-207ENST00000527733 NCAPD2Q15021 1401 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 TMX3Q96JJ7 454 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
USP47-207ENST00000527733 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 SETD1BQ9UPS6 1966 aaKnown RBP17.61■□□□□ 0.41
USP47-207ENST00000527733 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 KIF5BP33176 963 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
USP47-207ENST00000527733 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
USP47-207ENST00000527733 LPIN2Q92539 896 aa17.61■□□□□ 0.41
USP47-207ENST00000527733 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
USP47-207ENST00000527733 GIGYF2Q6Y7W6 1299 aaKnown RBP17.6■□□□□ 0.41
USP47-207ENST00000527733 OGFOD1Q8N543 542 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 PIGBQ92521 554 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
USP47-207ENST00000527733 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
USP47-207ENST00000527733 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 CCDC192P0DO97 292 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 METAP2P50579 478 aaKnown RBP eCLIP17.6■□□□□ 0.41
USP47-207ENST00000527733 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 CEP131Q9UPN4 1083 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 IPO7O95373 1038 aaKnown RBP17.6■□□□□ 0.41
USP47-207ENST00000527733 GJB2P29033 226 aa17.6■□□□□ 0.41
USP47-207ENST00000527733 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
USP47-207ENST00000527733 CTSWP56202 376 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
USP47-207ENST00000527733 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 MYO1BO43795 1136 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 PLCG2P16885 1265 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 HIBADHP31937 336 aaKnown RBP17.59■□□□□ 0.41
USP47-207ENST00000527733 GUCY1B3Q02153 619 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 WTAPQ15007 396 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 HDAC9Q9UKV0 1011 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 KLF18A0A0U1RQI7 1052 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 BAG6P46379 1132 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
USP47-207ENST00000527733 SSFA2P28290 1259 aa17.58■□□□□ 0.41
USP47-207ENST00000527733 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.41
USP47-207ENST00000527733 FLAD1Q8NFF5 587 aa17.58■□□□□ 0.41
USP47-207ENST00000527733 STX6O43752 255 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 UFL1O94874 794 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 USP26Q9BXU7 913 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 SNX21Q969T3 373 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 LRRC2Q9BYS8 371 aa17.58■□□□□ 0.4
USP47-207ENST00000527733 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 KRT18P05783 430 aaKnown RBP17.57■□□□□ 0.4
USP47-207ENST00000527733 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 TAF5LO75529 589 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
USP47-207ENST00000527733 CCDC178Q5BJE1 867 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
USP47-207ENST00000527733 ZBTB43O43298 467 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 SEC24BO95487 1268 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
USP47-207ENST00000527733 OVOS2A0A0J9YW53 1432 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 OVOS2Q6IE36 1432 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
USP47-207ENST00000527733 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 NECAB1Q8N987 351 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 ZNF76P36508 570 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 Q6ZUG5 572 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms