RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 EAF2Q96CJ1 260 aaPredicted RBP23■■□□□ 1.27
SMPD1-203ENST00000527275 TBC1D32Q96NH3 1257 aa23■■□□□ 1.27
SMPD1-203ENST00000527275 LRP5O75197 1615 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 SPEF2Q9C093 1822 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 SRGNP10124 158 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
SMPD1-203ENST00000527275 MFAP1P55081 439 aaKnown RBP22.99■■□□□ 1.27
SMPD1-203ENST00000527275 METTL24Q5JXM2 366 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 TTC22Q5TAA0 569 aa22.99■■□□□ 1.27
SMPD1-203ENST00000527275 BSDC1Q9NW68 430 aaPredicted RBP22.99■■□□□ 1.27
SMPD1-203ENST00000527275 GSPT1P15170 499 aaKnown RBP22.98■■□□□ 1.27
SMPD1-203ENST00000527275 AACSQ86V21 672 aa22.98■■□□□ 1.27
SMPD1-203ENST00000527275 GRAPQ13588 217 aa22.97■■□□□ 1.27
SMPD1-203ENST00000527275 GRAPLQ8TC17 118 aaPredicted RBP22.97■■□□□ 1.27
SMPD1-203ENST00000527275 RBM17Q96I25 401 aaKnown RBP22.97■■□□□ 1.27
SMPD1-203ENST00000527275 POLD1P28340 1107 aa22.97■■□□□ 1.27
SMPD1-203ENST00000527275 TNNI3KQ59H18 835 aa22.97■■□□□ 1.27
SMPD1-203ENST00000527275 VGLL2Q8N8G2 317 aa22.97■■□□□ 1.27
SMPD1-203ENST00000527275 HELBQ8NG08 1087 aaPredicted RBP22.97■■□□□ 1.27
SMPD1-203ENST00000527275 FPGT-TNNI3KV9GXZ4 949 aa22.97■■□□□ 1.27
SMPD1-203ENST00000527275 MROH5Q6ZUA9 1318 aa22.96■■□□□ 1.27
SMPD1-203ENST00000527275 SALL3Q9BXA9 1300 aa22.96■■□□□ 1.27
SMPD1-203ENST00000527275 IFIT2P09913 472 aaKnown RBP22.96■■□□□ 1.27
SMPD1-203ENST00000527275 CCDC8Q9H0W5 538 aaPredicted RBP22.96■■□□□ 1.27
SMPD1-203ENST00000527275 PDE8BO95263 885 aa22.95■■□□□ 1.26
SMPD1-203ENST00000527275 MX1P20591 662 aa22.95■■□□□ 1.26
SMPD1-203ENST00000527275 TIMM10P62072 90 aa22.95■■□□□ 1.26
SMPD1-203ENST00000527275 CHRNDQ07001 517 aa22.95■■□□□ 1.26
SMPD1-203ENST00000527275 TSHZ3Q63HK5 1081 aa22.95■■□□□ 1.26
SMPD1-203ENST00000527275 TAF5LO75529 589 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 PDE1AP54750 535 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 CRAMP1Q96RY5 1269 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 C22orf23Q9BZE7 217 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 TLR7Q9NYK1 1049 aaKnown RBP22.94■■□□□ 1.26
SMPD1-203ENST00000527275 DAXXQ9UER7 740 aaPredicted RBP22.94■■□□□ 1.26
SMPD1-203ENST00000527275 MINPP1Q9UNW1 487 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 NPR1P16066 1061 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 C2CD5Q86YS7 1000 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 OSBPL3Q9H4L5 887 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 GPR108Q9NPR9 543 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
SMPD1-203ENST00000527275 A0A1B0GUL7 405 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 H0YIN7 160 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 TBC1D9Q6ZT07 1266 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 MASTLQ96GX5 879 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 COL11A2P13942 1736 aaPredicted RBP22.93■■□□□ 1.26
SMPD1-203ENST00000527275 CDC45O75419 566 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 CHRNA5P30532 468 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 SLC51AQ86UW1 340 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 DBNLQ9UJU6 430 aaKnown RBP22.93■■□□□ 1.26
SMPD1-203ENST00000527275 AKAP2Q9Y2D5 859 aa22.93■■□□□ 1.26
SMPD1-203ENST00000527275 PTGER2P43116 358 aa22.92■■□□□ 1.26
SMPD1-203ENST00000527275 SNAP23O00161 211 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 BBOX1O75936 387 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 ZNF622Q969S3 477 aaKnown RBP eCLIP22.91■■□□□ 1.26
SMPD1-203ENST00000527275 ZNF609O15014 1411 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 DBNDD2Q9BQY9 259 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 STAP2Q9UGK3 403 aa22.91■■□□□ 1.26
SMPD1-203ENST00000527275 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
SMPD1-203ENST00000527275 ALDH1B1P30837 517 aa22.9■■□□□ 1.26
SMPD1-203ENST00000527275 SDSP20132 328 aa22.89■■□□□ 1.26
SMPD1-203ENST00000527275 PUM3Q15397 648 aaKnown RBP22.89■■□□□ 1.26
SMPD1-203ENST00000527275 WTIPA6NIX2 430 aaPredicted RBP22.89■■□□□ 1.25
SMPD1-203ENST00000527275 FGFR2P21802 821 aa22.88■■□□□ 1.25
SMPD1-203ENST00000527275 ECHDC1Q9NTX5 307 aa22.88■■□□□ 1.25
SMPD1-203ENST00000527275 ADORA1P30542 326 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 STYK1Q6J9G0 422 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 XAGE2Q96GT9 111 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 TTC41PQ6P2S7 1318 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 PI4K2BQ8TCG2 481 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 LPIN2Q92539 896 aa22.87■■□□□ 1.25
SMPD1-203ENST00000527275 PPP1R1BQ9UD71 204 aaPredicted RBP22.87■■□□□ 1.25
SMPD1-203ENST00000527275 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 PPEF1O14829 653 aaPredicted RBP22.86■■□□□ 1.25
SMPD1-203ENST00000527275 GPATCH3Q96I76 525 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 ANKRD2Q9GZV1 360 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 KIF13BQ9NQT8 1826 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 SPON1Q9HCB6 807 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 ANKIB1Q9P2G1 1089 aa22.86■■□□□ 1.25
SMPD1-203ENST00000527275 EIF5BO60841 1220 aaKnown RBP22.85■■□□□ 1.25
SMPD1-203ENST00000527275 A0A1B0GUL6 1792 aa22.85■■□□□ 1.25
SMPD1-203ENST00000527275 DPEP1P16444 411 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 BECN1Q14457 450 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 PRPF40BQ6NWY9 871 aaKnown RBP22.84■■□□□ 1.25
SMPD1-203ENST00000527275 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 CNKSR1Q969H4 720 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 NSFL1CQ9UNZ2 370 aaKnown RBP22.84■■□□□ 1.25
SMPD1-203ENST00000527275 ATP6V0A2Q9Y487 856 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 AOX1Q06278 1338 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 RBM25P49756 843 aaKnown RBP22.84■■□□□ 1.25
SMPD1-203ENST00000527275 OLFM4Q6UX06 510 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 SP8Q8IXZ3 490 aa22.84■■□□□ 1.25
SMPD1-203ENST00000527275 SLC5A1P13866 664 aa22.83■■□□□ 1.25
SMPD1-203ENST00000527275 KCNA3P22001 575 aa22.83■■□□□ 1.25
SMPD1-203ENST00000527275 UBE4AQ14139 1066 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms