RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 EPHA4P54764 986 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 GRIK5Q16478 980 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 PERM1Q5SV97 790 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 MAP4K3Q8IVH8 894 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 POU5F2Q8N7G0 328 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 CEP41Q9BYV8 373 aa5.79□□□□□ -1.48
CLNS1A-208ENST00000527265 LZTS3O60299 673 aaPredicted RBP5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 CRTC2Q53ET0 693 aaPredicted RBP5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 B4GALNT3Q6L9W6 998 aa5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 DNAJC14Q6Y2X3 702 aaPredicted RBP5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 DBNDD2Q9BQY9 259 aa5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 ANGEL1Q9UNK9 670 aaKnown RBP5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 NOVA2Q9UNW9 492 aaKnown RBP5.78□□□□□ -1.48
CLNS1A-208ENST00000527265 FAM196BA6NMK8 535 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L15C9J2P7 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L10C9JJH3 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L13C9JLJ4 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L12C9JPN9 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L11C9JVI0 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L21D6R901 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L18D6R9N7 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L22D6RA61 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L17D6RBQ6 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L19D6RCP7 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L20D6RJB6 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 RASA1P20936 1047 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 USP17L24Q0WX57 530 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 ELOAQ14241 798 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 LARP1Q6PKG0 1096 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 Q6ZS46 218 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 SMG9Q9H0W8 520 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 ZMIZ1Q9ULJ6 1067 aa5.77□□□□□ -1.49
CLNS1A-208ENST00000527265 MAP3K6O95382 1288 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 EIF2AK2P19525 551 aaKnown RBP5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 PTK7Q13308 1070 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 UVSSAQ2YD98 709 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 RNF43Q68DV7 783 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 DHX32Q7L7V1 743 aaKnown RBP5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 TRIM50Q86XT4 487 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 TRPM4Q8TD43 1214 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 STK32AQ8WU08 396 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 UTP4Q969X6 686 aaKnown RBP5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
CLNS1A-208ENST00000527265 PPM1GO15355 546 aaPredicted RBP5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 TCF3P15923 654 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 ZNF16P17020 682 aaPredicted RBP5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 ERCC3P19447 782 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 CLDN10P78369 228 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 GPLD1P80108 840 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 TMEM164Q5U3C3 297 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 AGGF1Q8N302 714 aaeCLIP5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 OGFOD1Q8N543 542 aa5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 ZNF594Q96JF6 807 aaPredicted RBP5.75□□□□□ -1.49
CLNS1A-208ENST00000527265 ATP1A2P50993 1020 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 NOM1Q5C9Z4 860 aaKnown RBP5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 IER5Q5VY09 327 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 ANKMY2Q8IV38 441 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 ALDH16A1Q8IZ83 802 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 ABI1Q8IZP0 508 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 CCER1Q8TC90 406 aaPredicted RBP5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 TSPAN10Q9H1Z9 355 aaPredicted RBP5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 C7orf69Q9H7B7 122 aa5.74□□□□□ -1.49
CLNS1A-208ENST00000527265 MLLT1Q03111 559 aaPredicted RBP5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 PLAURQ03405 335 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 GDF6Q6KF10 455 aaPredicted RBP5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 TRIM42Q8IWZ5 723 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 LARGE2Q8N3Y3 721 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 GIMAP7Q8NHV1 300 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 FAM200AQ8TCP9 573 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 SREK1Q8WXA9 508 aaKnown RBP5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 DRC1Q96MC2 740 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 C8orf37Q96NL8 207 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 BCL2L13Q9BXK5 485 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 RBSNQ9H1K0 784 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 KIAA1024Q9UPX6 916 aa5.73□□□□□ -1.49
CLNS1A-208ENST00000527265 PRR19A6NJB7 356 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 ZBTB7BO15156 539 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 PPP1R12BO60237 982 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 RARAP10276 462 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 JUNBP17275 347 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 CANXP27824 592 aaKnown RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 DPYDQ12882 1025 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 POTEAQ6S8J7 498 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 KRT25Q7Z3Z0 450 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 SIX5Q8N196 739 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 IL22RA1Q8N6P7 574 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 TPCN2Q8NHX9 752 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 GIPC2Q8TF65 315 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 UBL7Q96S82 380 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 MUC3BQ9H195 1237 aa5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 RBM19Q9Y4C8 960 aaKnown RBP5.72□□□□□ -1.49
CLNS1A-208ENST00000527265 HMX2A2RU54 273 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 TGFBR3LH3BV60 316 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 GHRHP01286 108 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 NRLP54845 237 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 FAM69CQ0P6D2 419 aa5.71□□□□□ -1.5
CLNS1A-208ENST00000527265 FBLN7Q53RD9 439 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms