RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 NPR1P16066 1061 aa11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
TRIM49D2-201ENST00000526396 MS4A1P11836 297 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 HOXA10P31260 410 aaPredicted RBP11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 RABL6Q3YEC7 729 aaPredicted RBP11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 ZBTB40Q9NUA8 1239 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 GNAI2P04899 355 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 GNAI3P08754 354 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 ITGA6P23229 1130 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 RBM17Q96I25 401 aaKnown RBP11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
TRIM49D2-201ENST00000526396 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 GRAPQ13588 217 aa11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 TTLL6Q8N841 843 aa11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 GRAPLQ8TC17 118 aaPredicted RBP11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 CRAMP1Q96RY5 1269 aa11.08□□□□□ -0.64
TRIM49D2-201ENST00000526396 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 C21orf2O43822 256 aa11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 DALRD3Q5D0E6 543 aaKnown RBP11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 CEP85Q6P2H3 762 aa11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 SIRT2Q8IXJ6 389 aa11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
TRIM49D2-201ENST00000526396 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 MAP3K13O43283 966 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 HSP90B1P14625 803 aaKnown RBP11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
TRIM49D2-201ENST00000526396 DUOX1Q9NRD9 1551 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 RPS8P62241 208 aaKnown RBP11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 MTX1Q13505 466 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 CCDC57Q2TAC2 916 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 SIL1Q9H173 461 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 PCDHB15Q9Y5E8 787 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
TRIM49D2-201ENST00000526396 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 RASSF7Q02833 373 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 ATP6V0A2Q9Y487 856 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 A0A1B0GUL6 1792 aa11.04□□□□□ -0.64
TRIM49D2-201ENST00000526396 SNAP23O00161 211 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 NFKBIEO00221 500 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 PRELPP51888 382 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 GPSM2P81274 684 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 ATP8B2P98198 1209 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 GPR162Q16538 588 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 POTEHQ6S545 545 aa11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 GPR101Q96P66 508 aaPredicted RBP11.03□□□□□ -0.64
TRIM49D2-201ENST00000526396 BBOX1O75936 387 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 IGHMBP2P38935 993 aaKnown RBP11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 PSEN1P49768 467 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 IFNL1Q8IU54 200 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 SSH3Q8TE77 659 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.64
TRIM49D2-201ENST00000526396 COL4A5P29400 1685 aa11.02□□□□□ -0.65
TRIM49D2-201ENST00000526396 KLRK1P26718 216 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 CHRNDQ07001 517 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 LDHAL6AQ6ZMR3 332 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 SP8Q8IXZ3 490 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 FER1L6Q2WGJ9 1857 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 TAF5LO75529 589 aa11.01□□□□□ -0.65
TRIM49D2-201ENST00000526396 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms