RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 CDC25BP30305 580 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
LTBP3-204ENST00000525443 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 SLC24A3Q9HC58 644 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 RGS12O14924 1447 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 CCDC158Q5M9N0 1113 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 MRPL50Q8N5N7 158 aaKnown RBP17.24■□□□□ 0.35
LTBP3-204ENST00000525443 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
LTBP3-204ENST00000525443 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-204ENST00000525443 SMC2O95347 1197 aa17.23■□□□□ 0.35
LTBP3-204ENST00000525443 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
LTBP3-204ENST00000525443 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
LTBP3-204ENST00000525443 LRRC31Q6UY01 552 aa17.23■□□□□ 0.35
LTBP3-204ENST00000525443 TPM1P09493 284 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 HOXC9P31274 260 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
LTBP3-204ENST00000525443 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 HNRNPH1P31943 449 aaKnown RBP17.22■□□□□ 0.35
LTBP3-204ENST00000525443 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
LTBP3-204ENST00000525443 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 GOLGA6L19H0YKK7 550 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 LIG3P49916 1009 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 FBXW10Q5XX13 1052 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
LTBP3-204ENST00000525443 NAIF1Q69YI7 327 aaPredicted RBP17.21■□□□□ 0.35
LTBP3-204ENST00000525443 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
LTBP3-204ENST00000525443 A0A087WUV0 522 aaPredicted RBP17.21■□□□□ 0.35
LTBP3-204ENST00000525443 N4BP1O75113 896 aaKnown RBP17.21■□□□□ 0.35
LTBP3-204ENST00000525443 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
LTBP3-204ENST00000525443 GNAI3P08754 354 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 MCM6Q14566 821 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 FAM173BQ6P4H8 233 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 AKAP2Q9Y2D5 859 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 TRDNQ13061 729 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 FAN1Q9Y2M0 1017 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-204ENST00000525443 NEBLO76041 1014 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 ERLIN2O94905 339 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 MRFAP1L1Q96HT8 127 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
LTBP3-204ENST00000525443 CHL1O00533 1208 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
LTBP3-204ENST00000525443 PARD6BQ9BYG5 372 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 LONRF2Q1L5Z9 754 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 GIMAP7Q8NHV1 300 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
LTBP3-204ENST00000525443 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
LTBP3-204ENST00000525443 H0YHG0 523 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 SARNPP82979 210 aaKnown RBP17.18■□□□□ 0.34
LTBP3-204ENST00000525443 FAXDC2Q96IV6 333 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
LTBP3-204ENST00000525443 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
LTBP3-204ENST00000525443 FANCGO15287 622 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 PHACTR2O75167 634 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 INHBEP58166 350 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 MIEF2Q96C03 454 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
LTBP3-204ENST00000525443 PAX7P23759 505 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 ETF1P62495 437 aaKnown RBP17.17■□□□□ 0.34
LTBP3-204ENST00000525443 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
LTBP3-204ENST00000525443 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 IGSF1Q8N6C5 1336 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 C11orf57Q6ZUT1 292 aaPredicted RBP17.17■□□□□ 0.34
LTBP3-204ENST00000525443 FERMT3Q86UX7 667 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
LTBP3-204ENST00000525443 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.17■□□□□ 0.34
LTBP3-204ENST00000525443 A0A087WWV3 80 aa17.16■□□□□ 0.34
LTBP3-204ENST00000525443 IFIT2P09913 472 aaKnown RBP17.16■□□□□ 0.34
LTBP3-204ENST00000525443 API5Q9BZZ5 524 aaKnown RBP17.16■□□□□ 0.34
LTBP3-204ENST00000525443 IQCB1Q15051 598 aa17.16■□□□□ 0.34
LTBP3-204ENST00000525443 C11orf91Q3C1V1 193 aa17.16■□□□□ 0.34
LTBP3-204ENST00000525443 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
LTBP3-204ENST00000525443 SARM1Q6SZW1 724 aa17.16■□□□□ 0.34
LTBP3-204ENST00000525443 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
LTBP3-204ENST00000525443 ANAPC15P60006 121 aa17.15■□□□□ 0.34
LTBP3-204ENST00000525443 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
LTBP3-204ENST00000525443 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms