RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 NOGQ13253 232 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 KRT26Q7Z3Y9 468 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
TRAPPC4-206ENST00000525303 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 MLLT1Q03111 559 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 EYA3Q99504 573 aa12.42□□□□□ -0.42
TRAPPC4-206ENST00000525303 ADM5C9JUS6 153 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 ANP32CO43423 234 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 RGMBQ6NW40 437 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
TRAPPC4-206ENST00000525303 CACNA1FO60840 1977 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 FAM155AB1AL88 458 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 RGS19P49795 217 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 DGKZQ13574 1117 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 KIF4BQ2VIQ3 1234 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 SEC31BQ9NQW1 1179 aa12.4□□□□□ -0.42
TRAPPC4-206ENST00000525303 G3V3G9 751 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 UFL1O94874 794 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 MYD88Q99836 296 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 PRKRIP1Q9H875 184 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 ANKIB1Q9P2G1 1089 aa12.39□□□□□ -0.43
TRAPPC4-206ENST00000525303 ASTN2O75129 1339 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 GGA1Q9UJY5 639 aa12.38□□□□□ -0.43
TRAPPC4-206ENST00000525303 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 ZNF609O15014 1411 aa12.37□□□□□ -0.43
TRAPPC4-206ENST00000525303 A0A1B0GUL6 1792 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 PDE8AO60658 829 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 CWC25Q9NXE8 425 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 SAGE1Q9NXZ1 904 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 XDHP47989 1333 aa12.36□□□□□ -0.43
TRAPPC4-206ENST00000525303 APAF1O14727 1248 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 TRPA1O75762 1119 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 SLC34A2O95436 690 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 SLC10A3P09131 477 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 GNAI1P63096 354 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 SCARF1Q14162 830 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 RNF186Q9NXI6 227 aa12.35□□□□□ -0.43
TRAPPC4-206ENST00000525303 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
TRAPPC4-206ENST00000525303 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 USP17L8P0C7I0 530 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 RASAL3Q86YV0 1011 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 GMLQ99445 158 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
TRAPPC4-206ENST00000525303 WTIPA6NIX2 430 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 CTSWP56202 376 aa12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms