RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 LMBR1Q8WVP7 490 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC94Q9BW85 323 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 RABEP2Q9H5N1 569 aa15.51■□□□□ 0.07
LRRK1-202ENST00000525284 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 MTRF1LQ9UGC7 380 aaKnown RBP15.51■□□□□ 0.07
LRRK1-202ENST00000525284 HAUS7Q99871 368 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 ZSCAN23Q3MJ62 389 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
LRRK1-202ENST00000525284 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 RUFY3Q7L099 469 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 MCUR1Q96AQ8 359 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 GUCA1BQ9UMX6 200 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 FYB2Q5VWT5 728 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 CTAGE1Q96RT6 745 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 ATP6V0A2Q9Y487 856 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.5■□□□□ 0.07
LRRK1-202ENST00000525284 CXorf38Q8TB03 319 aa15.5■□□□□ 0.07
LRRK1-202ENST00000525284 ANO6Q4KMQ2 910 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 VCXQ9H320 206 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 XAB2Q9HCS7 855 aaKnown RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 BTBD11A6QL63 1104 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 GLRX3O76003 335 aaKnown RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 TOM1L2Q6ZVM7 507 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 SYT1P21579 422 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 CLUL1Q15846 466 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC122Q5T0U0 273 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 GPRASP1Q5JY77 1395 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 VAV2P52735 878 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 LZTFL1Q9NQ48 299 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 ANKIB1Q9P2G1 1089 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 PPFIA2O75334 1257 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC38Q502W7 563 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 MIER3Q7Z3K6 550 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 PDCD7Q8N8D1 485 aaKnown RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 PYM1Q9BRP8 204 aaKnown RBP15.49■□□□□ 0.07
LRRK1-202ENST00000525284 FRMD4BQ9Y2L6 1034 aa15.49■□□□□ 0.07
LRRK1-202ENST00000525284 IGF1RP08069 1367 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 KIF1BPQ96EK5 621 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 INF2Q27J81 1249 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 ZNF569Q5MCW4 686 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 SYKP43405 635 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
LRRK1-202ENST00000525284 SLC26A6Q9BXS9 759 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 INPP5BP32019 993 aa15.48■□□□□ 0.07
LRRK1-202ENST00000525284 KRT86O43790 486 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 SF3A3Q12874 501 aaKnown RBP eCLIP15.47■□□□□ 0.07
LRRK1-202ENST00000525284 CALCOCO2Q13137 446 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 FAM212AQ96EL1 285 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 VTI1AQ96AJ9 217 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 RAB3IPQ96QF0 476 aaPredicted RBP15.47■□□□□ 0.07
LRRK1-202ENST00000525284 STAT6P42226 847 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 UBE2HP62256 183 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 PNMA8AQ86V59 439 aaPredicted RBP15.47■□□□□ 0.07
LRRK1-202ENST00000525284 BANK1Q8NDB2 785 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 CCDC8Q9H0W5 538 aaPredicted RBP15.47■□□□□ 0.07
LRRK1-202ENST00000525284 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 KRT83P78385 493 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 SH2D4BQ5SQS7 431 aa15.47■□□□□ 0.07
LRRK1-202ENST00000525284 RNF41Q9H4P4 317 aaPredicted RBP15.47■□□□□ 0.07
LRRK1-202ENST00000525284 MCM7P33993 719 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 PPP2R5CQ13362 524 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 TMEM67Q5HYA8 995 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 USP37Q86T82 979 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 AOPEPQ8N6M6 819 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 ANKFY1Q9P2R3 1169 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 WHAMMP3Q1A5X7 153 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 HDXQ7Z353 690 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
LRRK1-202ENST00000525284 COG7P83436 770 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 CUL4BQ13620 913 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 AFAP1L1Q8TED9 768 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 GBP5Q96PP8 586 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 NDUFAB1O14561 156 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 FAM13AO94988 1023 aa15.46■□□□□ 0.07
LRRK1-202ENST00000525284 MAK16Q9BXY0 300 aaKnown RBP15.46■□□□□ 0.07
LRRK1-202ENST00000525284 ORC3Q9UBD5 711 aaPredicted RBP15.46■□□□□ 0.07
LRRK1-202ENST00000525284 BAG1Q99933 345 aaPredicted RBP15.46■□□□□ 0.06
LRRK1-202ENST00000525284 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 PHLDB2Q86SQ0 1253 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 SPECC1L-ADORA2AF8WAN1 911 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 GCKP35557 465 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 SYT10Q6XYQ8 523 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 JAKMIP2Q96AA8 810 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms