RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CELF1Q92879 486 aaKnown RBP8.17□□□□□ -1.1
CD44-214ENST00000525211 SYT17Q9BSW7 474 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 TMEM106CQ9BVX2 250 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 PLA2G12BQ9BX93 195 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 PUS3Q9BZE2 481 aaKnown RBP8.17□□□□□ -1.1
CD44-214ENST00000525211 NYXQ9GZU5 481 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 PA2G4Q9UQ80 394 aaKnown RBP8.17□□□□□ -1.1
CD44-214ENST00000525211 GOLGB1Q14789 3259 aaKnown RBP8.17□□□□□ -1.1
CD44-214ENST00000525211 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 PDE8AO60658 829 aa8.16□□□□□ -1.1
CD44-214ENST00000525211 UBTFL1P0CB47 393 aaPredicted RBP8.16□□□□□ -1.1
CD44-214ENST00000525211 GTF2E1P29083 439 aaPredicted RBP8.16□□□□□ -1.1
CD44-214ENST00000525211 ST5P78524 1137 aa8.16□□□□□ -1.1
CD44-214ENST00000525211 SF3B3Q15393 1217 aaKnown RBP8.16□□□□□ -1.1
CD44-214ENST00000525211 RABL6Q3YEC7 729 aaPredicted RBP8.16□□□□□ -1.1
CD44-214ENST00000525211 LRP5O75197 1615 aa8.15□□□□□ -1.1
CD44-214ENST00000525211 RIC1Q4ADV7 1423 aa8.15□□□□□ -1.1
CD44-214ENST00000525211 SNAP23O00161 211 aa8.15□□□□□ -1.1
CD44-214ENST00000525211 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
CD44-214ENST00000525211 NBR1Q14596 966 aa8.15□□□□□ -1.1
CD44-214ENST00000525211 CEP85Q6P2H3 762 aa8.15□□□□□ -1.1
CD44-214ENST00000525211 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.15□□□□□ -1.1
CD44-214ENST00000525211 ZNF622Q969S3 477 aaKnown RBP eCLIP8.15□□□□□ -1.1
CD44-214ENST00000525211 SLX4Q8IY92 1834 aa8.15□□□□□ -1.11
CD44-214ENST00000525211 NPHP1O15259 732 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 GNAI2P04899 355 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 YBX3P16989 372 aaKnown RBP eCLIP8.14□□□□□ -1.11
CD44-214ENST00000525211 ITGA6P23229 1130 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
CD44-214ENST00000525211 PRELPP51888 382 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 ATP8B2P98198 1209 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 PTPN12Q05209 780 aaKnown RBP8.14□□□□□ -1.11
CD44-214ENST00000525211 LRRC24Q50LG9 513 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 DDX19BQ9UMR2 479 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 CD2APQ9Y5K6 639 aa8.14□□□□□ -1.11
CD44-214ENST00000525211 SNED1Q8TER0 1413 aa8.13□□□□□ -1.11
CD44-214ENST00000525211 IGHDP01880 384 aa8.13□□□□□ -1.11
CD44-214ENST00000525211 GNAI3P08754 354 aa8.13□□□□□ -1.11
CD44-214ENST00000525211 MS4A4AQ96JQ5 239 aa8.13□□□□□ -1.11
CD44-214ENST00000525211 GPR101Q96P66 508 aaPredicted RBP8.13□□□□□ -1.11
CD44-214ENST00000525211 H0YIN7 160 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 C21orf2O43822 256 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 NPR1P16066 1061 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 PDE6BP35913 854 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 TGFB2P61812 414 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 EVX2Q03828 476 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 MTX1Q13505 466 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 GRAPQ13588 217 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 STYK1Q6J9G0 422 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 PRPF40BQ6NWY9 871 aaKnown RBP8.12□□□□□ -1.11
CD44-214ENST00000525211 ATG9AQ7Z3C6 839 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 SKAP1Q86WV1 359 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
CD44-214ENST00000525211 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
CD44-214ENST00000525211 SSH3Q8TE77 659 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 CRAMP1Q96RY5 1269 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 SIL1Q9H173 461 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 BRCA1P38398 1863 aaKnown RBP8.12□□□□□ -1.11
CD44-214ENST00000525211 CACNA1SQ13698 1873 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
CD44-214ENST00000525211 MYH3P11055 1940 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 RTL9Q8NET4 1388 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 SPEF2Q9C093 1822 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 HAX1O00165 279 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 SRGAP3O43295 1099 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
CD44-214ENST00000525211 MS4A1P11836 297 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 KLRK1P26718 216 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 RPS8P62241 208 aaKnown RBP8.11□□□□□ -1.11
CD44-214ENST00000525211 GPSM2P81274 684 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 CCDC152Q4G0S7 254 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
CD44-214ENST00000525211 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
CD44-214ENST00000525211 WDR70Q9NW82 654 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 MINPP1Q9UNW1 487 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 BCS1LQ9Y276 419 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 UTRNP46939 3433 aa8.11□□□□□ -1.11
CD44-214ENST00000525211 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 ANKRD18BA2A2Z9 1011 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 TTLL13PA6NNM8 815 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 PPEF1O14829 653 aaPredicted RBP8.1□□□□□ -1.11
CD44-214ENST00000525211 TAF5LO75529 589 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 SASH1O94885 1247 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 TIE1P35590 1138 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 RASSF7Q02833 373 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 IFIT5Q13325 482 aaKnown RBP8.1□□□□□ -1.11
CD44-214ENST00000525211 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
CD44-214ENST00000525211 TXNRD3Q86VQ6 643 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 COL4A5P29400 1685 aa8.1□□□□□ -1.11
CD44-214ENST00000525211 IRS2Q9Y4H2 1338 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms