RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SNED1Q8TER0 1413 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 NPHP1O15259 732 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 Q6ZNB5 142 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 IBTKQ9P2D0 1353 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-205ENST00000525124 ERVV-1B6SEH8 477 aa11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 CNGB1Q14028 1251 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 E2F4Q16254 413 aa11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 SPRYD3Q8NCJ5 442 aa11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 NIP7Q9Y221 180 aaKnown RBP eCLIP11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-205ENST00000525124 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 NEFMP07197 916 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 DCTN1Q14203 1278 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 RTKN2Q8IZC4 609 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 TATDN2Q93075 761 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 ERBB4Q15303 1308 aa11.08□□□□□ -0.64
DEPDC1-205ENST00000525124 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1-205ENST00000525124 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
DEPDC1-205ENST00000525124 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
DEPDC1-205ENST00000525124 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 HLFQ16534 295 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 PSMD1Q99460 953 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 PASKQ96RG2 1323 aa11.06□□□□□ -0.64
DEPDC1-205ENST00000525124 OSBPP22059 807 aa11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 HOXA10P31260 410 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 COL13A1Q5TAT6 717 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 TAF1DQ9H5J8 278 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
DEPDC1-205ENST00000525124 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
DEPDC1-205ENST00000525124 FZD9O00144 591 aa11.04□□□□□ -0.64
DEPDC1-205ENST00000525124 IARSP41252 1262 aaKnown RBP11.04□□□□□ -0.64
DEPDC1-205ENST00000525124 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
DEPDC1-205ENST00000525124 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 THSD7BQ9C0I4 1608 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 LCE2BO14633 110 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 HSPA1AP0DMV8 641 aaKnown RBP11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 HSPA1BP0DMV9 641 aaKnown RBP11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 ZNF34Q8IZ26 560 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 MTRQ99707 1265 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 MIS18AQ9NYP9 233 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 LRRC37AA6NMS7 1700 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 DDX60Q8IY21 1712 aaKnown RBP11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
DEPDC1-205ENST00000525124 TAF1P21675 1872 aa11.02□□□□□ -0.64
DEPDC1-205ENST00000525124 COL4A5P29400 1685 aa11.02□□□□□ -0.64
DEPDC1-205ENST00000525124 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 GPC2Q8N158 579 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 ZNF541Q9H0D2 1346 aa11.02□□□□□ -0.65
DEPDC1-205ENST00000525124 NTSR2O95665 410 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 PARP10Q53GL7 1025 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 NUDT18Q6ZVK8 323 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 PPP1R42Q7Z4L9 355 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
DEPDC1-205ENST00000525124 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 FAM177BA6PVY3 158 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 GFRA3O60609 400 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 EPHX2P34913 555 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 OLFM4Q6UX06 510 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 TNS4Q8IZW8 715 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 JDP2Q8WYK2 163 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 RPGRQ92834 1020 aaKnown RBP11□□□□□ -0.65
DEPDC1-205ENST00000525124 IL21Q9HBE4 155 aa11□□□□□ -0.65
DEPDC1-205ENST00000525124 RRP7AQ9Y3A4 280 aaKnown RBP11□□□□□ -0.65
DEPDC1-205ENST00000525124 MYL6BP14649 208 aa10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 LAPTM4AQ15012 233 aa10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 RALBP1Q15311 655 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms