RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ANKRD1Q15327 319 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 VPS53Q5VIR6 699 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 ZNF34Q8IZ26 560 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 FNBP4Q8N3X1 1017 aaPredicted RBP8.95□□□□□ -0.98
CASP4-204ENST00000524843 MARCH10Q8NA82 808 aaPredicted RBP8.95□□□□□ -0.98
CASP4-204ENST00000524843 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 TTC14Q96N46 770 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 SLC4A9Q96Q91 983 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 DBNDD2Q9BQY9 259 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 IL25Q9H293 177 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 ALDH8A1Q9H2A2 487 aaPredicted RBP8.95□□□□□ -0.98
CASP4-204ENST00000524843 HELLSQ9NRZ9 838 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
CASP4-204ENST00000524843 CNTNAP4Q9C0A0 1308 aa8.95□□□□□ -0.98
CASP4-204ENST00000524843 LY75O60449 1722 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 MYH14Q7Z406 1995 aaKnown RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 IRS4O14654 1257 aaPredicted RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 CRKLP46109 303 aaKnown RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 KCNJ4P48050 445 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 NECTIN1Q15223 517 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 L1TD1Q5T7N2 865 aaKnown RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 USPL1Q5W0Q7 1092 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 ZNF512BQ96KM6 892 aaPredicted RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 PAG1Q9NWQ8 432 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 CCDC9Q9Y3X0 531 aaKnown RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
CASP4-204ENST00000524843 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 ATRNO75882 1429 aa8.94□□□□□ -0.98
CASP4-204ENST00000524843 A0A0D9SFI3 127 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 A0A1B0GUL7 405 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 IFIT1P09914 478 aaKnown RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 ATP6V1AP38606 617 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 PIP4K2BP78356 416 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 MCMDC2Q4G0Z9 681 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 CREB3L3Q68CJ9 461 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 CLEC4GQ6UXB4 293 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 DNAJC2Q99543 621 aaKnown RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 DSCC1Q9BVC3 393 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 TRMT112Q9UI30 125 aaKnown RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 LIMCH1Q9UPQ0 1083 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
CASP4-204ENST00000524843 MROH5Q6ZUA9 1318 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 A0A1B0GUL6 1792 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 DOCK2Q92608 1830 aa8.93□□□□□ -0.98
CASP4-204ENST00000524843 LAMA4Q16363 1823 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 UBN2Q6ZU65 1347 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 WDR33Q9C0J8 1336 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 TRAK2O60296 914 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 CAMTA2O94983 1202 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 BAG4O95429 457 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 CASTP20810 708 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 ITGA6P23229 1130 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 HMGB2P26583 209 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 SSFA2P28290 1259 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 PTH1RQ03431 593 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 TTF1Q15361 905 aaPredicted RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 ATP2B3Q16720 1220 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 METTL24Q5JXM2 366 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 TTC39AQ5SRH9 613 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 DCAF8Q5TAQ9 597 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 PRPF40BQ6NWY9 871 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 RUFY3Q7L099 469 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 TTLL11Q8NHH1 800 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 JARID2Q92833 1246 aaPredicted RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 CHMP4CQ96CF2 233 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 FAM89AQ96GI7 184 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 FAM227BQ96M60 508 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 JAKMIP1Q96N16 626 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 NEUROD6Q96NK8 337 aa8.92□□□□□ -0.98
CASP4-204ENST00000524843 UTP14AQ9BVJ6 771 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 UPF3BQ9BZI7 483 aaKnown RBP8.92□□□□□ -0.98
CASP4-204ENST00000524843 SBF2Q86WG5 1849 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 TAF1LQ8IZX4 1826 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 SLC27A2O14975 620 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 TAF5LO75529 589 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 BRD1O95696 1058 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 UQCRFS1P1P0C7P4 283 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 HLFQ16534 295 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 KLHL40Q2TBA0 621 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 CCDC152Q4G0S7 254 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 LRRC24Q50LG9 513 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 GORABQ5T7V8 394 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
CASP4-204ENST00000524843 ZSCAN25Q6NSZ9 544 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 BLOC1S2Q6QNY1 142 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms