RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 KBTBD3Q8NAB2 608 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 LEO1Q8WVC0 666 aaPredicted RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 BRF1Q92994 677 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 SPATA32Q96LK8 384 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 DNAJC2Q99543 621 aaKnown RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 SPTLC3Q9NUV7 552 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 MRVI1Q9Y6F6 885 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 LAMB2P55268 1798 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 A0A087WZG4 1122 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 GOLGA6L6A8MZA4 724 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
PKP3-202ENST00000524646 HSP90B1P14625 803 aaKnown RBP10.55□□□□□ -0.72
PKP3-202ENST00000524646 ATF3P18847 181 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 CABP4P57796 275 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 CCDC129Q6ZRS4 1044 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
PKP3-202ENST00000524646 PDCL3Q9H2J4 239 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 TIAM2Q8IVF5 1701 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 SPATA31A3Q5VYP0 1347 aa10.55□□□□□ -0.72
PKP3-202ENST00000524646 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 NUP98P52948 1817 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 H7C1W4 665 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 JAK2O60674 1132 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 PFKFB2O60825 505 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 DTNBO60941 627 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
PKP3-202ENST00000524646 CYP21A2P08686 494 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
PKP3-202ENST00000524646 FOXO4P98177 505 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 STK3Q13188 491 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 NAA16Q6N069 864 aaPredicted RBP10.54□□□□□ -0.72
PKP3-202ENST00000524646 Q6ZUG5 572 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 STOX1Q6ZVD7 989 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 DDX46Q7L014 1031 aaKnown RBP10.54□□□□□ -0.72
PKP3-202ENST00000524646 PRIMPOLQ96LW4 560 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 DSCC1Q9BVC3 393 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 CWC25Q9NXE8 425 aaPredicted RBP10.54□□□□□ -0.72
PKP3-202ENST00000524646 KIF3AQ9Y496 699 aa10.54□□□□□ -0.72
PKP3-202ENST00000524646 PHLPP1O60346 1717 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 GOLGA6L4A6NEF3 574 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 CIAO1O76071 339 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 FAM173BQ6P4H8 233 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 LMBR1LQ6UX01 489 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 ATG9AQ7Z3C6 839 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
PKP3-202ENST00000524646 JARID2Q92833 1246 aaPredicted RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 ZSCAN16Q9H4T2 348 aaPredicted RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 TTC12Q9H892 705 aaPredicted RBP10.53□□□□□ -0.72
PKP3-202ENST00000524646 PAG1Q9NWQ8 432 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 DACT1Q9NYF0 836 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 MAST3O60307 1309 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 WDR17Q8IZU2 1322 aa10.53□□□□□ -0.72
PKP3-202ENST00000524646 A0A1B0GUL6 1792 aa10.52□□□□□ -0.72
PKP3-202ENST00000524646 ATRNO75882 1429 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 H3BQV1 296 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 AP5Z1O43299 807 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
PKP3-202ENST00000524646 CHRNA2Q15822 529 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 IFFO2Q5TF58 517 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NBPF10Q6P3W6 841 aaKnown RBP10.52□□□□□ -0.73
PKP3-202ENST00000524646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
PKP3-202ENST00000524646 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NSUN7Q8NE18 718 aaKnown RBP10.52□□□□□ -0.73
PKP3-202ENST00000524646 SEC62Q99442 399 aaKnown RBP10.52□□□□□ -0.73
PKP3-202ENST00000524646 AGXT2Q9BYV1 514 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 KCNF1Q9H3M0 494 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 CHMP3Q9Y3E7 222 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 SALL1Q9NSC2 1324 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
PKP3-202ENST00000524646 PTPDC1A2A3K4 754 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 EYA2O00167 538 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 GOLIM4O00461 696 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 CAVIN2O95810 425 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 SCRN1Q12765 414 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 ANO6Q4KMQ2 910 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
PKP3-202ENST00000524646 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
PKP3-202ENST00000524646 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
PKP3-202ENST00000524646 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms