RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 CDC37L1Q7L3B6 337 aa20.96■□□□□ 0.95
HIF3A-208ENST00000524533 ZNF408Q9H9D4 720 aa20.96■□□□□ 0.95
HIF3A-208ENST00000524533 RTL9Q8NET4 1388 aa20.96■□□□□ 0.95
HIF3A-208ENST00000524533 RPS12P25398 132 aaKnown RBP20.95■□□□□ 0.94
HIF3A-208ENST00000524533 SAPCD2Q86UD0 394 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 TSPYL6Q8N831 410 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
HIF3A-208ENST00000524533 PODXL2Q9NZ53 605 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 MAP3K2Q9Y2U5 619 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 MYH3P11055 1940 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 SCN9AQ15858 1988 aa20.95■□□□□ 0.94
HIF3A-208ENST00000524533 SPEF2Q9C093 1822 aa20.94■□□□□ 0.94
HIF3A-208ENST00000524533 UFL1O94874 794 aa20.94■□□□□ 0.94
HIF3A-208ENST00000524533 JARID2Q92833 1246 aaPredicted RBP20.94■□□□□ 0.94
HIF3A-208ENST00000524533 CCDC85AQ96PX6 553 aaPredicted RBP20.94■□□□□ 0.94
HIF3A-208ENST00000524533 BEGAINQ9BUH8 593 aa20.94■□□□□ 0.94
HIF3A-208ENST00000524533 ZC3H12CQ9C0D7 883 aaKnown RBP20.94■□□□□ 0.94
HIF3A-208ENST00000524533 ANKIB1Q9P2G1 1089 aa20.94■□□□□ 0.94
HIF3A-208ENST00000524533 PSME4Q14997 1843 aa20.94■□□□□ 0.94
HIF3A-208ENST00000524533 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
HIF3A-208ENST00000524533 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
HIF3A-208ENST00000524533 SAMD7Q7Z3H4 446 aa20.93■□□□□ 0.94
HIF3A-208ENST00000524533 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
HIF3A-208ENST00000524533 GGA1Q9UJY5 639 aa20.93■□□□□ 0.94
HIF3A-208ENST00000524533 G3V3G9 751 aa20.92■□□□□ 0.94
HIF3A-208ENST00000524533 CCDC27Q2M243 656 aa20.92■□□□□ 0.94
HIF3A-208ENST00000524533 DCAF8Q5TAQ9 597 aa20.92■□□□□ 0.94
HIF3A-208ENST00000524533 KSR2Q6VAB6 950 aa20.92■□□□□ 0.94
HIF3A-208ENST00000524533 KCNQ5Q9NR82 932 aa20.92■□□□□ 0.94
HIF3A-208ENST00000524533 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 AOC2O75106 756 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 NEXNQ0ZGT2 675 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 USP48Q86UV5 1035 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 HHIPL1Q96JK4 782 aa20.91■□□□□ 0.94
HIF3A-208ENST00000524533 XDHP47989 1333 aa20.9■□□□□ 0.94
HIF3A-208ENST00000524533 EGFRP00533 1210 aa20.9■□□□□ 0.94
HIF3A-208ENST00000524533 IGKV5-2P06315 115 aa20.9■□□□□ 0.94
HIF3A-208ENST00000524533 MAP2K2P36507 400 aa20.9■□□□□ 0.94
HIF3A-208ENST00000524533 TWISTNBQ3B726 338 aaPredicted RBP20.9■□□□□ 0.94
HIF3A-208ENST00000524533 CTSWP56202 376 aa20.89■□□□□ 0.93
HIF3A-208ENST00000524533 RBM26Q5T8P6 1007 aaKnown RBP20.89■□□□□ 0.93
HIF3A-208ENST00000524533 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
HIF3A-208ENST00000524533 ZNF609O15014 1411 aa20.88■□□□□ 0.93
HIF3A-208ENST00000524533 VIL1P09327 827 aaKnown RBP20.88■□□□□ 0.93
HIF3A-208ENST00000524533 KIF4BQ2VIQ3 1234 aa20.88■□□□□ 0.93
HIF3A-208ENST00000524533 KRT26Q7Z3Y9 468 aa20.88■□□□□ 0.93
HIF3A-208ENST00000524533 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
HIF3A-208ENST00000524533 IL16Q14005 1332 aa20.87■□□□□ 0.93
HIF3A-208ENST00000524533 DCPSQ96C86 337 aaKnown RBP20.87■□□□□ 0.93
HIF3A-208ENST00000524533 POLR2AP24928 1970 aaKnown RBP20.86■□□□□ 0.93
HIF3A-208ENST00000524533 ADM5C9JUS6 153 aa20.86■□□□□ 0.93
HIF3A-208ENST00000524533 ATP2B4P23634 1241 aa20.86■□□□□ 0.93
HIF3A-208ENST00000524533 HUNKP57058 714 aa20.86■□□□□ 0.93
HIF3A-208ENST00000524533 CWF19L2Q2TBE0 894 aaKnown RBP20.86■□□□□ 0.93
HIF3A-208ENST00000524533 DLK2Q6UY11 383 aa20.86■□□□□ 0.93
HIF3A-208ENST00000524533 NEURL1BA8MQ27 555 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 SLC4A2P04920 1241 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 BRPF1P55201 1214 aaPredicted RBP20.85■□□□□ 0.93
HIF3A-208ENST00000524533 RSBN1LQ6PCB5 846 aaPredicted RBP20.85■□□□□ 0.93
HIF3A-208ENST00000524533 G2E3Q7L622 706 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 TTLL11Q8NHH1 800 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 GREM2Q9H772 168 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 GGA3Q9NZ52 723 aa20.85■□□□□ 0.93
HIF3A-208ENST00000524533 CA12O43570 354 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 AGBL3Q8NEM8 1001 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 GBA2Q9HCG7 927 aaPredicted RBP20.84■□□□□ 0.93
HIF3A-208ENST00000524533 MRS2Q9HD23 443 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 TSKSQ9UJT2 592 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 MED23Q9ULK4 1368 aa20.84■□□□□ 0.93
HIF3A-208ENST00000524533 ZNF646O15015 1829 aaPredicted RBP20.83■□□□□ 0.93
HIF3A-208ENST00000524533 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.93
HIF3A-208ENST00000524533 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
HIF3A-208ENST00000524533 NOGQ13253 232 aa20.83■□□□□ 0.93
HIF3A-208ENST00000524533 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
HIF3A-208ENST00000524533 SULF1Q8IWU6 871 aa20.83■□□□□ 0.93
HIF3A-208ENST00000524533 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.93
HIF3A-208ENST00000524533 ZNF280AP59817 542 aaPredicted RBP20.82■□□□□ 0.92
HIF3A-208ENST00000524533 FLIIQ13045 1269 aa20.82■□□□□ 0.92
HIF3A-208ENST00000524533 PODNQ7Z5L7 613 aa20.82■□□□□ 0.92
HIF3A-208ENST00000524533 C2orf69Q8N8R5 385 aa20.82■□□□□ 0.92
HIF3A-208ENST00000524533 MINPP1Q9UNW1 487 aa20.82■□□□□ 0.92
HIF3A-208ENST00000524533 ASTN2O75129 1339 aaPredicted RBP20.81■□□□□ 0.92
HIF3A-208ENST00000524533 USP17L3A6NCW0 530 aa20.81■□□□□ 0.92
HIF3A-208ENST00000524533 USP17L4A6NCW7 530 aa20.81■□□□□ 0.92
HIF3A-208ENST00000524533 H7C1W4 665 aa20.81■□□□□ 0.92
HIF3A-208ENST00000524533 FKBP5Q13451 457 aaPredicted RBP20.81■□□□□ 0.92
HIF3A-208ENST00000524533 USP17L1Q7RTZ2 530 aa20.81■□□□□ 0.92
HIF3A-208ENST00000524533 ABHD8Q96I13 439 aa20.81■□□□□ 0.92
HIF3A-208ENST00000524533 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
HIF3A-208ENST00000524533 GCKRQ14397 625 aa20.8■□□□□ 0.92
HIF3A-208ENST00000524533 RGMBQ6NW40 437 aa20.8■□□□□ 0.92
HIF3A-208ENST00000524533 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
HIF3A-208ENST00000524533 USP17L8P0C7I0 530 aa20.79■□□□□ 0.92
HIF3A-208ENST00000524533 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
HIF3A-208ENST00000524533 ANGEL2Q5VTE6 544 aaKnown RBP20.79■□□□□ 0.92
HIF3A-208ENST00000524533 CDCA5Q96FF9 252 aa20.79■□□□□ 0.92
HIF3A-208ENST00000524533 GMLQ99445 158 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms