RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 ATP10DQ9P241 1426 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 MRC1P22897 1456 aa9.35□□□□□ -0.91
CTR9-202ENST00000524523 NHSL1Q5SYE7 1610 aa9.35□□□□□ -0.91
CTR9-202ENST00000524523 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 SNRPA1P09661 255 aaKnown RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 IL2RBP14784 551 aa9.35□□□□□ -0.91
CTR9-202ENST00000524523 ZNF598Q86UK7 904 aaKnown RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
CTR9-202ENST00000524523 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
CTR9-202ENST00000524523 AHDC1Q5TGY3 1603 aaPredicted RBP9.34□□□□□ -0.91
CTR9-202ENST00000524523 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
CTR9-202ENST00000524523 CYP27B1O15528 508 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 EVA1CP58658 441 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 ATP8B2P98198 1209 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 KSR2Q6VAB6 950 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 G2E3Q7L622 706 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 DNAAF4Q8WXU2 420 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 FMNL2Q96PY5 1086 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 SRCIN1Q9C0H9 1055 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
CTR9-202ENST00000524523 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 CABP4P57796 275 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 MTX1Q13505 466 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
CTR9-202ENST00000524523 HSP90AB4PQ58FF6 505 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
CTR9-202ENST00000524523 USP44Q9H0E7 712 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
CTR9-202ENST00000524523 THRAP3Q9Y2W1 955 aaKnown RBP9.33□□□□□ -0.92
CTR9-202ENST00000524523 UTYO14607 1347 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 KDM6AO15550 1401 aaPredicted RBP9.32□□□□□ -0.92
CTR9-202ENST00000524523 MEGF6O75095 1541 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 LTBP4Q8N2S1 1624 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 PKD1L3Q7Z443 1732 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 TOM1O60784 492 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 UBTFL1P0CB47 393 aaPredicted RBP9.32□□□□□ -0.92
CTR9-202ENST00000524523 BEND3Q5T5X7 828 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
CTR9-202ENST00000524523 LINS1Q8NG48 757 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 MEIS3Q99687 375 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
CTR9-202ENST00000524523 PI4KAP2A4QPH2 592 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 F6X3S4 739 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 GFRA3O60609 400 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 LILRB3O75022 631 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 EIF2S2P20042 333 aaKnown RBP9.31□□□□□ -0.92
CTR9-202ENST00000524523 PTPRNQ16849 979 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 PI4KAP1Q8N8J0 262 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 SSH3Q8TE77 659 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
CTR9-202ENST00000524523 COL15A1P39059 1388 aa9.3□□□□□ -0.92
CTR9-202ENST00000524523 KCNQ3O43525 872 aa9.3□□□□□ -0.92
CTR9-202ENST00000524523 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
CTR9-202ENST00000524523 QPCTQ16769 361 aa9.3□□□□□ -0.92
CTR9-202ENST00000524523 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
CTR9-202ENST00000524523 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
CTR9-202ENST00000524523 COL22A1Q8NFW1 1626 aaPredicted RBP9.3□□□□□ -0.92
CTR9-202ENST00000524523 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
CTR9-202ENST00000524523 RGPD2P0DJD1 1756 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 CFAP99D6REC4 459 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 EPB41L2O43491 1005 aaKnown RBP9.29□□□□□ -0.92
CTR9-202ENST00000524523 NEXNQ0ZGT2 675 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 TSC1Q92574 1164 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
CTR9-202ENST00000524523 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 NOP58Q9Y2X3 529 aaKnown RBP9.29□□□□□ -0.92
CTR9-202ENST00000524523 SCN11AQ9UI33 1791 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 AOX1Q06278 1338 aa9.29□□□□□ -0.92
CTR9-202ENST00000524523 RGPD5Q99666 1765 aa9.28□□□□□ -0.92
CTR9-202ENST00000524523 TRIM32Q13049 653 aa9.28□□□□□ -0.92
CTR9-202ENST00000524523 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
CTR9-202ENST00000524523 LRRCC1Q9C099 1032 aa9.28□□□□□ -0.92
CTR9-202ENST00000524523 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
CTR9-202ENST00000524523 N4BP2Q86UW6 1770 aaPredicted RBP9.27□□□□□ -0.92
CTR9-202ENST00000524523 ADCY9O60503 1353 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
CTR9-202ENST00000524523 RBM25P49756 843 aaKnown RBP9.27□□□□□ -0.93
CTR9-202ENST00000524523 BECN1Q14457 450 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 LYPD8Q6UX82 237 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 LRP10Q7Z4F1 713 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 SKAP1Q86WV1 359 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 HELBQ8NG08 1087 aaPredicted RBP9.27□□□□□ -0.93
CTR9-202ENST00000524523 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms