RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ZNF34Q8IZ26 560 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 SYNE4Q8N205 404 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 TTLL6Q8N841 843 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 BACH2Q9BYV9 841 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 C21orf2O43822 256 aa8.83□□□□□ -1
VPS11-201ENST00000524454 NTSR2O95665 410 aa8.83□□□□□ -1
VPS11-201ENST00000524454 IGHDP01880 384 aa8.83□□□□□ -1
VPS11-201ENST00000524454 PRELPP51888 382 aa8.83□□□□□ -1
VPS11-201ENST00000524454 OLFM4Q6UX06 510 aa8.83□□□□□ -1
VPS11-201ENST00000524454 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
VPS11-201ENST00000524454 RPAP2Q8IXW5 612 aaPredicted RBP8.83□□□□□ -1
VPS11-201ENST00000524454 DBF4Q9UBU7 674 aaPredicted RBP8.83□□□□□ -1
VPS11-201ENST00000524454 ADCY9O60503 1353 aa8.83□□□□□ -1
VPS11-201ENST00000524454 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
VPS11-201ENST00000524454 EIF5BO60841 1220 aaKnown RBP8.82□□□□□ -1
VPS11-201ENST00000524454 SRGNP10124 158 aa8.82□□□□□ -1
VPS11-201ENST00000524454 PDE4AP27815 886 aa8.82□□□□□ -1
VPS11-201ENST00000524454 FAM161AQ3B820 660 aa8.82□□□□□ -1
VPS11-201ENST00000524454 C9orf131Q5VYM1 1079 aa8.82□□□□□ -1
VPS11-201ENST00000524454 PRPF40BQ6NWY9 871 aaKnown RBP8.82□□□□□ -1
VPS11-201ENST00000524454 RNF181Q9P0P0 153 aa8.82□□□□□ -1
VPS11-201ENST00000524454 TNNQ9UQP3 1299 aa8.82□□□□□ -1
VPS11-201ENST00000524454 COL4A1P02462 1669 aa8.81□□□□□ -1
VPS11-201ENST00000524454 NFKBIEO00221 500 aa8.81□□□□□ -1
VPS11-201ENST00000524454 GNAI3P08754 354 aa8.81□□□□□ -1
VPS11-201ENST00000524454 FLIIQ13045 1269 aa8.81□□□□□ -1
VPS11-201ENST00000524454 RTL5Q5HYW3 569 aaPredicted RBP8.81□□□□□ -1
VPS11-201ENST00000524454 STYK1Q6J9G0 422 aa8.81□□□□□ -1
VPS11-201ENST00000524454 MAMSTRQ6ZN01 415 aa8.81□□□□□ -1
VPS11-201ENST00000524454 G2E3Q7L622 706 aa8.81□□□□□ -1
VPS11-201ENST00000524454 NLRP10Q86W26 655 aa8.81□□□□□ -1
VPS11-201ENST00000524454 PLBD2Q8NHP8 589 aa8.81□□□□□ -1
VPS11-201ENST00000524454 MASTLQ96GX5 879 aa8.81□□□□□ -1
VPS11-201ENST00000524454 NYXQ9GZU5 481 aa8.81□□□□□ -1
VPS11-201ENST00000524454 SCUBE2Q9NQ36 999 aa8.81□□□□□ -1
VPS11-201ENST00000524454 HYPKQ9NX55 129 aa8.81□□□□□ -1
VPS11-201ENST00000524454 HDAC5Q9UQL6 1122 aa8.81□□□□□ -1
VPS11-201ENST00000524454 DICER1Q9UPY3 1922 aaKnown RBP8.8□□□□□ -1
VPS11-201ENST00000524454 G3V3G9 751 aa8.8□□□□□ -1
VPS11-201ENST00000524454 HMMRO75330 724 aa8.8□□□□□ -1
VPS11-201ENST00000524454 HCLS1P14317 486 aaPredicted RBP8.8□□□□□ -1
VPS11-201ENST00000524454 NPR1P16066 1061 aa8.8□□□□□ -1
VPS11-201ENST00000524454 NUCB1Q02818 461 aa8.8□□□□□ -1
VPS11-201ENST00000524454 TCIRG1Q13488 830 aa8.8□□□□□ -1
VPS11-201ENST00000524454 ANKRD13DQ6ZTN6 518 aa8.8□□□□□ -1
VPS11-201ENST00000524454 PPP1R42Q7Z4L9 355 aa8.8□□□□□ -1
VPS11-201ENST00000524454 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
VPS11-201ENST00000524454 ANKRD44Q8N8A2 993 aa8.8□□□□□ -1
VPS11-201ENST00000524454 JARID2Q92833 1246 aaPredicted RBP8.8□□□□□ -1
VPS11-201ENST00000524454 MYD88Q99836 296 aa8.8□□□□□ -1
VPS11-201ENST00000524454 UTP14AQ9BVJ6 771 aaKnown RBP8.8□□□□□ -1
VPS11-201ENST00000524454 SPEF2Q9C093 1822 aa8.8□□□□□ -1
VPS11-201ENST00000524454 KLRG2A4D1S0 409 aaPredicted RBP8.79□□□□□ -1
VPS11-201ENST00000524454 ANP32AP39687 249 aaKnown RBP8.79□□□□□ -1
VPS11-201ENST00000524454 PARP10Q53GL7 1025 aa8.79□□□□□ -1
VPS11-201ENST00000524454 CNKSR1Q969H4 720 aa8.79□□□□□ -1
VPS11-201ENST00000524454 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
VPS11-201ENST00000524454 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
VPS11-201ENST00000524454 TRMT112Q9UI30 125 aaKnown RBP8.79□□□□□ -1
VPS11-201ENST00000524454 KIF3CO14782 793 aa8.78□□□□□ -1
VPS11-201ENST00000524454 CRY2Q49AN0 593 aa8.78□□□□□ -1
VPS11-201ENST00000524454 HSP90AB3PQ58FF7 597 aa8.78□□□□□ -1
VPS11-201ENST00000524454 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
VPS11-201ENST00000524454 FAM89AQ96GI7 184 aa8.78□□□□□ -1
VPS11-201ENST00000524454 ISCA1Q9BUE6 129 aa8.78□□□□□ -1
VPS11-201ENST00000524454 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
VPS11-201ENST00000524454 MAP3K2Q9Y2U5 619 aa8.78□□□□□ -1
VPS11-201ENST00000524454 RIC1Q4ADV7 1423 aa8.78□□□□□ -1
VPS11-201ENST00000524454 LMNB1P20700 586 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
VPS11-201ENST00000524454 C8orf34Q49A92 452 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 C7orf43Q8WVR3 580 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 DCTPP1Q9H773 170 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 NMRK2Q9NPI5 230 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1.01
VPS11-201ENST00000524454 COL4A5P29400 1685 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 ALDH1L1O75891 902 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 DDX58O95786 925 aaKnown RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 GNAI2P04899 355 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 CWF19L2Q2TBE0 894 aaKnown RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 CEP85Q6P2H3 762 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 CHD1LQ86WJ1 897 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 SLAIN1Q8ND83 568 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 RBM17Q96I25 401 aaKnown RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 TAOK3Q9H2K8 898 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 ZNF277Q9NRM2 450 aaPredicted RBP8.76□□□□□ -1.01
VPS11-201ENST00000524454 MYH3P11055 1940 aa8.76□□□□□ -1.01
VPS11-201ENST00000524454 LRRC37AA6NMS7 1700 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 IGKV5-2P06315 115 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 ALDH1B1P30837 517 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 BMP2KLQ5H9B9 411 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 SLC10A5Q5PT55 438 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 SIRT2Q8IXJ6 389 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms