RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ETF1P62495 437 aaKnown RBP11.87□□□□□ -0.51
SPIDR-224ENST00000524126 DCTN1Q14203 1278 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 AOPEPQ8N6M6 819 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 PARD6BQ9BYG5 372 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 MAP2K2P36507 400 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 NFE2L2Q16236 605 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-224ENST00000524126 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
SPIDR-224ENST00000524126 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-224ENST00000524126 SMC2O95347 1197 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 TDO2P48775 406 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 ME3Q16798 604 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
SPIDR-224ENST00000524126 ISM2Q6H9L7 571 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 FAN1Q9Y2M0 1017 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 NSD2O96028 1365 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
SPIDR-224ENST00000524126 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-224ENST00000524126 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 SATB1Q01826 763 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 MCM6Q14566 821 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 LONRF2Q1L5Z9 754 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 ADCK5Q3MIX3 580 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
SPIDR-224ENST00000524126 MAP2P11137 1827 aaKnown RBP11.85□□□□□ -0.51
SPIDR-224ENST00000524126 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 HMMRO75330 724 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 KAT2BQ92831 832 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 CDC42BPGQ6DT37 1551 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 GSDMDP57764 484 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-224ENST00000524126 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
SPIDR-224ENST00000524126 LRRCC1Q9C099 1032 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
SPIDR-224ENST00000524126 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-224ENST00000524126 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
SPIDR-224ENST00000524126 CCDC189A1A4V9 331 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 FCHSD2O94868 740 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 STX1AQ16623 288 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 SLC4A10Q6U841 1118 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 JAKMIP1Q96N16 626 aaKnown RBP11.84□□□□□ -0.51
SPIDR-224ENST00000524126 PHACTR2O75167 634 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPIDR-224ENST00000524126 CEBPZQ03701 1054 aaKnown RBP11.84□□□□□ -0.51
SPIDR-224ENST00000524126 GOLGA8FQ08AF8 430 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 GOLGA8DPQ0D2H9 430 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-224ENST00000524126 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
SPIDR-224ENST00000524126 ZSWIM4Q9H7M6 989 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
SPIDR-224ENST00000524126 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 F6X3S4 739 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 CPP00450 1065 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 TPM1P09493 284 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 TADA2BQ86TJ2 420 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 IL1RAPL2Q9NP60 686 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 MED4Q9NPJ6 270 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 NPHP4O75161 1426 aaPredicted RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 MNAT1P51948 309 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 LARP1Q6PKG0 1096 aaKnown RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
SPIDR-224ENST00000524126 IFNKQ9P0W0 207 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
SPIDR-224ENST00000524126 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 MAP2K7O14733 419 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 SGSM2O43147 1006 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
SPIDR-224ENST00000524126 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
SPIDR-224ENST00000524126 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 ADCY9O60503 1353 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms