RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-223ENST00000524033 BCS1LQ9Y276 419 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 USP42Q9H9J4 1324 aaKnown RBP9.58□□□□□ -0.88
SPIDR-223ENST00000524033 IRF6O14896 467 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 STARD3NLO95772 234 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 TM4SF1P30408 202 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 ZNF445P59923 1031 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 TEFQ10587 303 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 KLHL40Q2TBA0 621 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 ARHGAP27Q6ZUM4 889 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 ZNF526Q8TF50 670 aaPredicted RBP9.58□□□□□ -0.88
SPIDR-223ENST00000524033 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 COL24A1Q17RW2 1714 aa9.58□□□□□ -0.88
SPIDR-223ENST00000524033 TRIM66O15016 1216 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 BAG4O95429 457 aaKnown RBP9.57□□□□□ -0.88
SPIDR-223ENST00000524033 HOXB1P14653 301 aaPredicted RBP9.57□□□□□ -0.88
SPIDR-223ENST00000524033 KCNA3P22001 575 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 FECHP22830 423 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
SPIDR-223ENST00000524033 C8orf58Q8NAV2 365 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
SPIDR-223ENST00000524033 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 PIM2Q9P1W9 311 aa9.57□□□□□ -0.88
SPIDR-223ENST00000524033 DDR1Q08345 913 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 CCDC173Q0VFZ6 552 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
SPIDR-223ENST00000524033 USP26Q9BXU7 913 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 NARFQ9UHQ1 456 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 ITGB4P16144 1822 aa9.56□□□□□ -0.88
SPIDR-223ENST00000524033 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
SPIDR-223ENST00000524033 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
SPIDR-223ENST00000524033 PDE4DQ08499 809 aa9.55□□□□□ -0.88
SPIDR-223ENST00000524033 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-223ENST00000524033 DALRD3Q5D0E6 543 aaKnown RBP9.55□□□□□ -0.88
SPIDR-223ENST00000524033 IL17RAQ96F46 866 aa9.55□□□□□ -0.88
SPIDR-223ENST00000524033 ZNF496Q96IT1 587 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-223ENST00000524033 ZBTB1Q9Y2K1 713 aa9.55□□□□□ -0.88
SPIDR-223ENST00000524033 PXDNLA1KZ92 1463 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 A0A087WZG4 1122 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 PTPREP23469 700 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 CHRNA5P30532 468 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 NUCB2P80303 420 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 NFIXQ14938 502 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 CEP85Q6P2H3 762 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
SPIDR-223ENST00000524033 FMNL2Q96PY5 1086 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 C10orf71Q711Q0 1435 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 SALL3Q9BXA9 1300 aa9.54□□□□□ -0.88
SPIDR-223ENST00000524033 CHL1O00533 1208 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 SERPINB2P05120 415 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 TPM2P07951 284 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
SPIDR-223ENST00000524033 RPAP2Q8IXW5 612 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-223ENST00000524033 PDLIM2Q96JY6 352 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
SPIDR-223ENST00000524033 LMBRD1Q9NUN5 540 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-223ENST00000524033 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 PTPRCP08575 1304 aa9.53□□□□□ -0.88
SPIDR-223ENST00000524033 ADCY9O60503 1353 aa9.52□□□□□ -0.88
SPIDR-223ENST00000524033 COL15A1P39059 1388 aa9.52□□□□□ -0.88
SPIDR-223ENST00000524033 GOLGA6L22H0YM25 854 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 RRP9O43818 475 aaKnown RBP9.52□□□□□ -0.89
SPIDR-223ENST00000524033 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 BICDL1Q6ZP65 573 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 UBR3Q6ZT12 1888 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 MCM10Q7L590 875 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 NAP1L5Q96NT1 182 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-223ENST00000524033 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-223ENST00000524033 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
SPIDR-223ENST00000524033 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-223ENST00000524033 KCNQ3O43525 872 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 A1BGP04217 495 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 IL6STP40189 918 aaPredicted RBP9.51□□□□□ -0.89
SPIDR-223ENST00000524033 TERF1P54274 439 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 HS1BP3Q53T59 392 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 C9orf131Q5VYM1 1079 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 ZSCAN30Q86W11 494 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 ZDHHC9Q9Y397 364 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 ZNF831Q5JPB2 1677 aa9.51□□□□□ -0.89
SPIDR-223ENST00000524033 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 H0YIN7 160 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
SPIDR-223ENST00000524033 SDSP20132 328 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 NASPP49321 788 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-223ENST00000524033 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 TTLL6Q8N841 843 aa9.5□□□□□ -0.89
SPIDR-223ENST00000524033 OTUD7AQ8TE49 926 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-223ENST00000524033 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms