RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
PTPN12-216ENST00000523952 CSRNP1Q96S65 589 aa12.28□□□□□ -0.44
PTPN12-216ENST00000523952 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
PTPN12-216ENST00000523952 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
PTPN12-216ENST00000523952 ERBB4Q15303 1308 aa12.28□□□□□ -0.44
PTPN12-216ENST00000523952 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
PTPN12-216ENST00000523952 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
PTPN12-216ENST00000523952 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
PTPN12-216ENST00000523952 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
PTPN12-216ENST00000523952 EYA3Q99504 573 aa12.27□□□□□ -0.45
PTPN12-216ENST00000523952 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
PTPN12-216ENST00000523952 GGA3Q9NZ52 723 aa12.27□□□□□ -0.45
PTPN12-216ENST00000523952 ECE2O60344 883 aa12.26□□□□□ -0.45
PTPN12-216ENST00000523952 MYH3P11055 1940 aa12.26□□□□□ -0.45
PTPN12-216ENST00000523952 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
PTPN12-216ENST00000523952 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
PTPN12-216ENST00000523952 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
PTPN12-216ENST00000523952 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
PTPN12-216ENST00000523952 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
PTPN12-216ENST00000523952 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
PTPN12-216ENST00000523952 EGFRP00533 1210 aa12.24□□□□□ -0.45
PTPN12-216ENST00000523952 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
PTPN12-216ENST00000523952 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
PTPN12-216ENST00000523952 MAPK8IP3Q9UPT6 1336 aa12.24□□□□□ -0.45
PTPN12-216ENST00000523952 TBC1D8O95759 1140 aa12.23□□□□□ -0.45
PTPN12-216ENST00000523952 FKBP1BP68106 108 aa12.23□□□□□ -0.45
PTPN12-216ENST00000523952 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
PTPN12-216ENST00000523952 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
PTPN12-216ENST00000523952 ZNF296Q8WUU4 475 aaPredicted RBP12.23□□□□□ -0.45
PTPN12-216ENST00000523952 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
PTPN12-216ENST00000523952 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
PTPN12-216ENST00000523952 ANXA1P04083 346 aa12.22□□□□□ -0.45
PTPN12-216ENST00000523952 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
PTPN12-216ENST00000523952 FBXO46Q6PJ61 603 aaPredicted RBP12.22□□□□□ -0.45
PTPN12-216ENST00000523952 NECTIN2Q92692 538 aa12.22□□□□□ -0.45
PTPN12-216ENST00000523952 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
PTPN12-216ENST00000523952 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
PTPN12-216ENST00000523952 NF2P35240 595 aa12.21□□□□□ -0.45
PTPN12-216ENST00000523952 TCIRG1Q13488 830 aa12.21□□□□□ -0.45
PTPN12-216ENST00000523952 SCARF1Q14162 830 aa12.21□□□□□ -0.45
PTPN12-216ENST00000523952 COPS6Q7L5N1 327 aa12.21□□□□□ -0.45
PTPN12-216ENST00000523952 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
PTPN12-216ENST00000523952 LAMB1P07942 1786 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 GPR25O00155 361 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 GPSM2P81274 684 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
PTPN12-216ENST00000523952 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 POLLQ9UGP5 575 aa12.2□□□□□ -0.46
PTPN12-216ENST00000523952 KIAA0100Q14667 2235 aaKnown RBP12.19□□□□□ -0.46
PTPN12-216ENST00000523952 ASTN2O75129 1339 aaPredicted RBP12.19□□□□□ -0.46
PTPN12-216ENST00000523952 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
PTPN12-216ENST00000523952 FKTNO75072 461 aa12.19□□□□□ -0.46
PTPN12-216ENST00000523952 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
PTPN12-216ENST00000523952 PROSER3Q2NL68 480 aa12.19□□□□□ -0.46
PTPN12-216ENST00000523952 HABP4Q5JVS0 413 aaKnown RBP12.19□□□□□ -0.46
PTPN12-216ENST00000523952 PITPNM2Q9BZ72 1349 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 UFL1O94874 794 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
PTPN12-216ENST00000523952 PDIA6Q15084 440 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
PTPN12-216ENST00000523952 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
PTPN12-216ENST00000523952 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
PTPN12-216ENST00000523952 ZNF646O15015 1829 aaPredicted RBP12.17□□□□□ -0.46
PTPN12-216ENST00000523952 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
PTPN12-216ENST00000523952 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
PTPN12-216ENST00000523952 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
PTPN12-216ENST00000523952 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
PTPN12-216ENST00000523952 COL4A1P02462 1669 aa12.16□□□□□ -0.46
PTPN12-216ENST00000523952 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 TM4SF4P48230 202 aa12.16□□□□□ -0.46
PTPN12-216ENST00000523952 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 RPS8P62241 208 aaKnown RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 SF3B3Q15393 1217 aaKnown RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 NOM1Q5C9Z4 860 aaKnown RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
PTPN12-216ENST00000523952 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
PTPN12-216ENST00000523952 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
PTPN12-216ENST00000523952 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
PTPN12-216ENST00000523952 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
PTPN12-216ENST00000523952 ZNF609O15014 1411 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 USP17L3A6NCW0 530 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 USP17L4A6NCW7 530 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
PTPN12-216ENST00000523952 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 PRKG1Q13976 671 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
PTPN12-216ENST00000523952 USP17L1Q7RTZ2 530 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms