RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
CTNNA1-240ENST00000523912 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
CTNNA1-240ENST00000523912 GPR101Q96P66 508 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-240ENST00000523912 ZC3H12CQ9C0D7 883 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-240ENST00000523912 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
CTNNA1-240ENST00000523912 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 RPS12P25398 132 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 CTSWP56202 376 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 LAMB2P55268 1798 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 XDHP47989 1333 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
CTNNA1-240ENST00000523912 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 ECE2O60344 883 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 SLC34A2O95436 690 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 FLIIQ13045 1269 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
CTNNA1-240ENST00000523912 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 PSMD14O00487 310 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 DPF2Q92785 391 aa11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-240ENST00000523912 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 TRAF5O00463 557 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 JARID2Q92833 1246 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-240ENST00000523912 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 MLLT1Q03111 559 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■■■■□ 21.6
CTNNA1-240ENST00000523912 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-240ENST00000523912 EXOSC9Q06265 439 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 NOGQ13253 232 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 GCKRQ14397 625 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 G2E3Q7L622 706 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 GLIS2Q9BZE0 524 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 GREM2Q9H772 168 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-240ENST00000523912 H7C1W4 665 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 VAMP4O75379 141 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 KCNJ4P48050 445 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 GRM1Q13255 1194 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 ANKRD2Q9GZV1 360 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
CTNNA1-240ENST00000523912 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 AOC2O75106 756 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 ITGA6P23229 1130 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 HIRAP54198 1017 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 KRT26Q7Z3Y9 468 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 MINPP1Q9UNW1 487 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 ZNF609O15014 1411 aa11.26□□□□□ -0.61
CTNNA1-240ENST00000523912 COL4A1P02462 1669 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 SHTN1A0MZ66 631 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 ANKRD18BA2A2Z9 1011 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 SAGE1Q9NXZ1 904 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 CHMP3Q9Y3E7 222 aa11.25□□□□□ -0.61
CTNNA1-240ENST00000523912 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms